{"id":"W2148699435","doi":"10.1128/jb.187.21.7214-7221.2005","title":"Function of the Conserved S1 and KH Domains in Polynucleotide Phosphorylase","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Polynucleotide phosphorylase; Biology; Exoribonuclease; RNase P; RNA; Biochemistry; Enzyme; Endoribonuclease; Purine nucleoside phosphorylase; Polynucleotide; Binding site; Binding domain; Molecular biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002042887,0.00006684882,0.0001474033,0.00003713831,0.00001936264,0.000004583198,0.0001322492,0.0001172761,0.00002981278],"category_scores_gemma":[0.0001149613,0.00004443025,0.00008196722,0.00005286617,0.000177708,0.000003257105,0.00009968983,0.0001551085,0.000001476619],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001035986,"about_ca_system_score_gemma":0.00006804598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001250591,"about_ca_topic_score_gemma":0.00004248833,"domain_scores_codex":[0.9993407,0.0001020416,0.0002681719,0.00009499654,0.00006765394,0.0001264556],"domain_scores_gemma":[0.999585,0.0000126266,0.0001531351,0.0001265687,0.00007036267,0.00005226669],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004143461,0.00004870845,0.00942094,0.000007609854,0.00003029681,0.000003133044,0.00001308022,0.000004278745,0.9866956,0.00003584653,0.0004581065,0.002868011],"study_design_scores_gemma":[0.001198504,0.0005167125,0.0969007,0.00002163673,0.00001554835,0.0001671831,0.00003137954,0.000008590679,0.8681479,0.00009124065,0.03283195,0.00006862394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975529,0.001078327,0.00005752861,0.001068285,0.00007882646,0.00005359328,0.000003614375,6.18937e-7,0.0001063128],"genre_scores_gemma":[0.9989661,0.0002699424,0.0001883243,0.0003798786,0.0001037084,0.000001038159,0.000003310927,0.000005936419,0.0000817779],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1185477,"threshold_uncertainty_score":0.1811813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007351089658769889,"score_gpt":0.2370930082909088,"score_spread":0.2297419186321389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}