{"id":"W2148703390","doi":"10.1128/iai.72.3.1537-1547.2004","title":"The<i>Burkholderia cepacia</i>Epidemic Strain Marker Is Part of a Novel Genomic Island Encoding Both Virulence and Metabolism-Associated Genes in<i>Burkholderia cenocepacia</i>","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Trust","keywords":"Biology; Burkholderia cenocepacia; Virulence; Genomic island; Burkholderia cepacia complex; Pathogenicity island; Genetics; Gene; Burkholderia; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006837545,0.0003034296,0.0001657337,0.0002935751,0.0001489212,0.0002713452,0.0001317923,0.00019031,0.000663672],"category_scores_gemma":[0.0002151186,0.0001070439,0.0001839883,0.0002385979,0.0001873787,0.0001408758,0.0002296545,0.0004918421,0.000258139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001842601,"about_ca_system_score_gemma":0.0002211354,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001069432,"about_ca_topic_score_gemma":0.001076191,"domain_scores_codex":[0.999899,0.00001005216,0.00000696601,0.00002648645,0.00003346994,0.0000239749],"domain_scores_gemma":[0.9996879,0.00004950739,0.0001444126,0.0000253702,0.00003079124,0.00006203592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000720341,0.00002200451,0.002154898,0.00002038914,0.000003820021,0.0001158703,0.000023276,0.00004063586,0.9950411,0.00008556448,0.00002757703,0.002393027],"study_design_scores_gemma":[0.00002613765,0.0005169589,0.1228043,0.00002654257,0.00004652155,0.002681744,0.0002017825,0.001428791,0.8655432,0.0002382298,0.006464088,0.00002167265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928461,0.0002910932,0.005271052,0.000108761,0.00001385984,0.00002730118,0.0005462244,0.00007936225,0.0008163486],"genre_scores_gemma":[0.9899521,0.0001566909,0.006928588,0.00005458558,0.00001408363,0.00002242246,0.001748028,0.00001752058,0.001106025],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001069432,"threshold_uncertainty_score":0.002220213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02605092476837402,"score_gpt":0.2943530587582686,"score_spread":0.2683021339898946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}