{"id":"W2148833420","doi":"10.1002/pmic.200600979","title":"Outer membrane proteome of <b><i>Actinobacillus pleuropneumoniae</i></b>: LC‐MS/MS analyses validate <b><i>in silico</i></b> predictions","year":2007,"lang":"en","type":"article","venue":"PROTEOMICS","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Institute for Biological Sciences; McGill University","funders":"","keywords":"Proteome; Actinobacillus pleuropneumoniae; In silico; Bacterial outer membrane; Biology; Microbiology; Proteomics; Computational biology; Genome; Actinobacillus; Membrane protein; Escherichia coli; Bacteria; Biochemistry; Gene; Serotype; Genetics; Membrane","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001722019,0.0003550661,0.0001807804,0.0002250444,0.0001796271,0.0003298123,0.000142779,0.0003091635,0.0005647721],"category_scores_gemma":[0.0003309762,0.000106863,0.0002293256,0.0002045738,0.00009987449,0.0001631653,0.0001365894,0.0002951816,0.000325983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000172127,"about_ca_system_score_gemma":0.000189171,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001185957,"about_ca_topic_score_gemma":0.0007376788,"domain_scores_codex":[0.999892,0.00001885767,0.000009825229,0.00002513587,0.00003289008,0.00002135212],"domain_scores_gemma":[0.9999057,0.00002351776,0.00002158178,0.0000086541,0.00002301228,0.00001748073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001025488,0.00001939661,0.001220249,0.00002877082,0.000005875774,0.00006341613,0.00001702292,0.0001360354,0.9974278,0.00002787494,0.000050751,0.0009003268],"study_design_scores_gemma":[0.00002459514,0.0004017843,0.0879909,0.0000262008,0.00006496179,0.0009705864,0.0001791116,0.006985195,0.8999912,0.000144207,0.003204482,0.00001692349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960172,0.0003292878,0.002020749,0.00005748002,0.000007732329,0.00001260487,0.0008685886,0.00004907884,0.0006373332],"genre_scores_gemma":[0.9874922,0.0004728629,0.006096886,0.0000699806,0.000006598771,0.00001887046,0.0050681,0.00004283491,0.0007316612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001185957,"threshold_uncertainty_score":0.002358079,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04112557813729373,"score_gpt":0.3262876906453427,"score_spread":0.285162112508049,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}