{"id":"W2148951508","doi":"10.1099/ijs.0.02328-0","title":"Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage","year":2003,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Dinoflagellate; Biology; Phylogenetic tree; Lineage (genetic); Evolutionary biology; Phylogenetics; Ribosomal RNA; Clade; Gene; Zoology; Genetics; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000240211,0.0003629399,0.0003389405,0.001190949,0.0005242427,0.0006259102,0.0001569084,0.0003543426,0.002042339],"category_scores_gemma":[0.0006181296,0.0002351296,0.000492566,0.001145832,0.0002693882,0.0005658557,0.0005694094,0.0004878829,0.0009659008],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002862776,"about_ca_system_score_gemma":0.0002483226,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001917348,"about_ca_topic_score_gemma":0.005302433,"domain_scores_codex":[0.9997917,0.00001577534,0.00001299733,0.0001080525,0.00003328561,0.00003821422],"domain_scores_gemma":[0.9993962,0.0001580625,0.0001956718,0.00006964258,0.00006155831,0.0001188121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009056473,0.000103633,0.5428767,0.0002674957,0.0005992846,0.0005073056,0.001437076,0.002494474,0.4016986,0.00064591,0.0009036242,0.04756032],"study_design_scores_gemma":[0.00001068853,0.0000780089,0.9865146,0.00002325421,0.0001358564,0.0005344752,0.0004854382,0.003848756,0.003963543,0.0004618964,0.003922959,0.00002057099],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961751,0.0005478662,0.001007017,0.00004398627,0.000004242378,0.000005629964,0.001169254,0.00005489933,0.0009919453],"genre_scores_gemma":[0.9893617,0.0003382951,0.00322449,0.00005476523,0.000006987429,0.00001569433,0.005960378,0.00004052278,0.0009971454],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002042339,"threshold_uncertainty_score":0.006832361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01154845348439952,"score_gpt":0.193508608884866,"score_spread":0.1819601554004665,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}