{"id":"W2148959145","doi":"10.7202/008906ar","title":"Applying comparative genomics to plant disease epidemiology","year":2004,"lang":"en","type":"article","venue":"Phytoprotection","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Genomics; Genetics; Population genomics; Evolutionary biology; Multilocus sequence typing; Genotyping; Pathosystem; Population; Genome; Population genetics; Genotype; Host (biology); Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001069693,0.0001119912,0.0001287237,0.00003555341,0.0001068428,0.000007173124,0.00007168712,0.00005365951,0.000004703237],"category_scores_gemma":[0.00008391459,0.000107682,0.00006673923,0.00005877722,0.0000224626,0.000002734718,0.0000433709,0.000057683,0.00005029142],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003359558,"about_ca_system_score_gemma":0.00004749008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002916426,"about_ca_topic_score_gemma":0.00003554354,"domain_scores_codex":[0.9992856,0.00004513405,0.0001365327,0.000292557,0.00004525138,0.000194926],"domain_scores_gemma":[0.9995672,0.000008319847,0.0000481385,0.0001713039,0.00002679952,0.0001782445],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004104239,0.00006425792,0.001987615,0.00001493314,0.00002534688,0.000005913179,0.0000231739,0.009469492,0.9863797,0.0002705226,0.0002771505,0.001071506],"study_design_scores_gemma":[0.001880441,0.001177359,0.2736719,0.0001023252,0.0001043684,0.00009857888,0.0001695244,0.0007196948,0.4974524,0.006360596,0.2170511,0.001211756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9490886,0.0005028197,0.04842556,0.0001642818,0.0001870728,0.0007995827,0.0005024135,0.00002934959,0.0003003349],"genre_scores_gemma":[0.9968792,0.00004463751,0.001280635,0.0006635262,0.0003293805,0.0004767613,0.0002720004,0.00000957222,0.00004429986],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4889273,"threshold_uncertainty_score":0.4391144,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04536113594403274,"score_gpt":0.2871351333367645,"score_spread":0.2417739973927318,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}