{"id":"W2149097350","doi":"10.1128/genomea.00597-13","title":"Draft Genome Sequence of <i>Exiguobacterium pavilionensis</i> Strain RW-2, with Wide Thermal, Salinity, and pH Tolerance, Isolated from Modern Freshwater Microbialites","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia","funders":"Canadian Space Agency; Tula Foundation; Canadian Institute for Advanced Research; National Aeronautics and Space Administration","keywords":"Strain (injury); Salinity; Whole genome sequencing; Biology; Genome; Botany; Gene; Genetics; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009814859,0.0003016137,0.0003193794,0.00004114649,0.0001132262,0.0000614543,0.0002416852,0.0001194506,0.00008445145],"category_scores_gemma":[0.000006338748,0.0002535474,0.00005868859,0.00007721811,0.0002207676,0.000007246907,0.000232892,0.00007855481,0.00001624518],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001408189,"about_ca_system_score_gemma":0.00005273377,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004528106,"about_ca_topic_score_gemma":0.0001297913,"domain_scores_codex":[0.9985142,0.00005536415,0.0003699809,0.0005259829,0.0001468129,0.0003876321],"domain_scores_gemma":[0.9990567,0.00001203216,0.0001750962,0.0004289173,0.0002277755,0.00009945466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009987163,0.00006952425,0.01336206,0.00002600079,0.000276894,0.000002551573,0.0005788272,0.0001963804,0.9849511,9.334077e-7,0.0001315625,0.0003042487],"study_design_scores_gemma":[0.007721981,0.003807709,0.4356726,0.0002004554,0.0004208348,0.00004186365,0.00104477,0.0005951052,0.3878483,0.001197391,0.1583376,0.003111394],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941869,0.002098266,0.0002703004,0.0001302802,0.00008292677,0.0004326705,0.002568246,0.000006553433,0.0002238517],"genre_scores_gemma":[0.9953827,0.0006622837,0.001137626,0.0008341535,0.0001100613,0.00004427343,0.001437267,0.00003554571,0.0003561489],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5971028,"threshold_uncertainty_score":0.9999917,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01186753809236683,"score_gpt":0.2088044232383056,"score_spread":0.1969368851459388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}