{"id":"W2149115022","doi":"10.1128/aem.02566-07","title":"Molecular Analysis as an Aid To Assess the Public Health Risk of Non-O157 Shiga Toxin-Producing <i>Escherichia coli</i> Strains","year":2008,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":185,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; McGill University; University of British Columbia; McMaster University; Public Health Agency of Canada","funders":"National Health and Medical Research Council; Institute of Infection and Immunity; Canadian Institutes of Health Research; Killam Trusts; Michael Smith Health Research BC; Medical Research Council; Public Health Agency; Public Health Agency of Canada; Howard Hughes Medical Institute","keywords":"Biology; Serotype; Virulence; Outbreak; Pathogenicity island; Shiga toxin; Microbiology; Escherichia coli; Transmission (telecommunications); Virology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004527144,0.0003924911,0.0001681877,0.001347373,0.0001455118,0.00047943,0.0002167314,0.0003666836,0.001013824],"category_scores_gemma":[0.0008495828,0.0001072489,0.0001555657,0.0004912597,0.0002217718,0.0002164215,0.0001859394,0.0002718107,0.0003697012],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000139206,"about_ca_system_score_gemma":0.0002225424,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007295555,"about_ca_topic_score_gemma":0.0006938996,"domain_scores_codex":[0.9997055,0.00009545014,0.00002532317,0.00005277923,0.00008272537,0.00003832746],"domain_scores_gemma":[0.9994733,0.0001391186,0.0001801897,0.00003403411,0.000111326,0.0000621249],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002144736,0.0001633987,0.0544575,0.0001006728,0.00001828587,0.0001565807,0.00008753937,0.0002328864,0.9324138,0.0001998704,0.00009190817,0.01186302],"study_design_scores_gemma":[0.00002070993,0.001058262,0.3500646,0.00005519016,0.00009502179,0.001335619,0.0007484949,0.004346964,0.6381173,0.0005199746,0.003615102,0.00002288809],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9799197,0.0010583,0.01463045,0.0001316736,0.00002750545,0.00009270784,0.0008422541,0.0001211102,0.003176448],"genre_scores_gemma":[0.977258,0.0009412225,0.01910293,0.00007602665,0.00001248778,0.00004453897,0.0008545131,0.00001484494,0.001695386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001347373,"threshold_uncertainty_score":0.003391564,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01515484079112799,"score_gpt":0.253510051097394,"score_spread":0.238355210306266,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}