{"id":"W2149193607","doi":"10.1128/jvi.01573-15","title":"Evolutionary Dynamics and Global Diversity of Influenza A Virus","year":2015,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Nonsynonymous substitution; Influenza A virus; Influenza A virus subtype H5N1; Global health; Pandemic; Diversity (politics); Phylogenetics; Evolutionary biology; Public health; Demography; Genetics; Genome; Coronavirus disease 2019 (COVID-19); Virus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009947579,0.0003001622,0.0002838918,0.001299803,0.0003315696,0.000804166,0.0002474078,0.0002662971,0.001260453],"category_scores_gemma":[0.001960945,0.0001012089,0.0002895675,0.002611661,0.0004152275,0.0007990493,0.0006538421,0.0003433946,0.0001469584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000311613,"about_ca_system_score_gemma":0.0002056255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002845494,"about_ca_topic_score_gemma":0.002875925,"domain_scores_codex":[0.9995219,0.0001433816,0.00005637058,0.0001766969,0.00005644594,0.0000451982],"domain_scores_gemma":[0.9981121,0.0005338232,0.0009729022,0.0001088272,0.0001796845,0.00009264098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005730661,0.000008716072,0.9892088,0.00006402001,0.0001821329,0.00003323744,0.0001702469,0.001251049,0.001342541,0.0001276145,0.00009786195,0.007456553],"study_design_scores_gemma":[0.000002595742,0.00003722467,0.9966611,0.00001852232,0.00003899564,0.0001237516,0.0002957772,0.001901617,0.0001847404,0.0002036938,0.000527474,0.00000452819],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960396,0.001436463,0.0008768345,0.0000931848,0.000007314261,0.000004897373,0.0008497024,0.000009894863,0.0006820288],"genre_scores_gemma":[0.9983307,0.0003604259,0.000543314,0.00002410579,0.00001333898,0.000004928076,0.0006770376,0.000003174633,0.00004308388],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002845494,"threshold_uncertainty_score":0.005657792,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08926057713987072,"score_gpt":0.3829743280271058,"score_spread":0.2937137508872351,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}