{"id":"W2149226827","doi":"10.1097/qad.0b013e32834785cf","title":"Reactivity profiles of broadly neutralizing anti-HIV-1 antibodies are distinct from those of pathogenic autoantibodies","year":2011,"lang":"en","type":"article","venue":"AIDS","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Public Health Service","keywords":"Epitope; Monoclonal antibody; Antibody; Antigen; Autoantibody; Immunology; Microarray; Virology; Monoclonal; Antiphospholipid syndrome; Medicine; Biology; Gene; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005092648,0.0002431756,0.0009872835,0.0002219583,0.00005802946,0.000008200286,0.000243036,0.0001426331,0.0001525073],"category_scores_gemma":[0.0005106842,0.0001892532,0.0002466449,0.0002862625,0.0003638123,0.0001571251,0.000177695,0.0002245329,0.00003541635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003887953,"about_ca_system_score_gemma":0.0001350391,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001058391,"about_ca_topic_score_gemma":0.00002244319,"domain_scores_codex":[0.9978961,0.0001857122,0.0006137115,0.0003957719,0.0005308695,0.0003777883],"domain_scores_gemma":[0.9980891,0.000288037,0.0004320689,0.0007686574,0.000303261,0.0001188935],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001570582,0.0002471035,0.7432977,0.0009690749,0.0001873758,0.00005896714,0.00282273,9.747244e-8,0.2510976,0.0001553639,0.0002142412,0.0007927112],"study_design_scores_gemma":[0.0008203959,0.0002242487,0.7383931,0.001887197,0.0001544391,0.0001977926,0.002518816,0.00002380718,0.2553866,0.0001802256,0.00006442233,0.0001488688],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992909,0.001729114,0.00009838593,0.0000374145,0.0001545871,0.0004969021,0.0002696873,0.00008146073,0.00422349],"genre_scores_gemma":[0.9964331,0.0002494268,0.002729636,0.000009557111,0.00009644734,0.00001692047,0.0000471524,0.00004406351,0.0003737445],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004904526,"threshold_uncertainty_score":0.7717524,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06341962173545834,"score_gpt":0.3112646647174411,"score_spread":0.2478450429819828,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}