{"id":"W2149332737","doi":"10.1002/ijc.29829","title":"Genomic hallmarks of homologous recombination deficiency in invasive breast carcinomas","year":2015,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"","keywords":"Breast cancer; Cancer research; Oncology; Biomarker; Cisplatin; SNP; Internal medicine; Biology; Medicine; Cancer; Gene; Chemotherapy; Genotype; Single-nucleotide polymorphism; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005502714,0.0001703574,0.0003406694,0.00117941,0.0001309497,0.0005506827,0.0001670703,0.0002656773,0.001861269],"category_scores_gemma":[0.00210267,0.0000928965,0.0002966271,0.0008326902,0.0001932279,0.0001501509,0.0004696997,0.0002443173,0.0003043938],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001516081,"about_ca_system_score_gemma":0.000164481,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005486677,"about_ca_topic_score_gemma":0.000897362,"domain_scores_codex":[0.9995849,0.00006710931,0.00004572606,0.0001495477,0.0001090087,0.00004372521],"domain_scores_gemma":[0.9986091,0.0005110791,0.0004235821,0.0002321211,0.0001093485,0.0001147733],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001807084,0.0001007666,0.8275404,0.0003072003,0.0004341591,0.001269211,0.0001550149,0.003391994,0.09523518,0.0005472382,0.001080371,0.06813139],"study_design_scores_gemma":[0.00003547117,0.0002905546,0.9767081,0.00002535963,0.0002306304,0.004104656,0.00009297725,0.003057875,0.01165668,0.001012951,0.002769072,0.0000155762],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928188,0.001183664,0.001639915,0.00004815047,0.000006234412,0.00001785814,0.003020431,0.00008592087,0.001178941],"genre_scores_gemma":[0.995941,0.0002255734,0.000712251,0.00002802814,0.000006440204,0.00001345809,0.00288669,0.00001085163,0.0001756557],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001861269,"threshold_uncertainty_score":0.006226599,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01362812140811927,"score_gpt":0.2767785132426678,"score_spread":0.2631503918345485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}