{"id":"W2149459654","doi":"10.1093/nar/gki504","title":"Retropseudogenes derived from the human Ro/SS-A autoantigen-associated hY RNAs","year":2005,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Pseudogene; Retrotransposon; Biology; Genetics; Gene; Genome; Negative selection; Human genome; RNA; Alu element; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001363857,0.0002045323,0.0001971472,0.00005756598,0.0007726718,0.0001333065,0.0009520993,0.0003481384,0.000802808],"category_scores_gemma":[0.0005289756,0.0001544803,0.0001481295,0.0002317584,0.0002550102,0.000008672013,0.0004023216,0.0003536879,0.0003270093],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006321056,"about_ca_system_score_gemma":0.0001110977,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003229442,"about_ca_topic_score_gemma":0.0002596276,"domain_scores_codex":[0.9971476,0.0006808231,0.0002737904,0.0005489169,0.0006663243,0.0006825391],"domain_scores_gemma":[0.998557,0.00009876653,0.00007637733,0.0008656392,0.0002563288,0.0001458285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004382737,0.00007362301,0.003243029,0.000002631136,0.00009844198,0.000005181395,0.0001303564,0.000004100303,0.9766075,0.0001898906,0.008847971,0.01075347],"study_design_scores_gemma":[0.0004177367,0.0002189721,0.01889517,0.00002265943,0.0000115271,0.000003070769,0.0001729938,0.00005430265,0.8872719,0.0006198607,0.09210205,0.0002097316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923667,0.001367157,0.0002293805,0.001842887,0.0001241507,0.0003595227,0.00004462102,0.00004079501,0.003624793],"genre_scores_gemma":[0.9925505,0.0003578934,0.0007586732,0.0003513654,0.0008679763,0.00005951186,0.0001217964,0.00006045503,0.004871857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08933555,"threshold_uncertainty_score":0.8790185,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04726221364399319,"score_gpt":0.3270573567379592,"score_spread":0.279795143093966,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}