{"id":"W2149578294","doi":"10.1128/iai.68.4.1884-1892.2000","title":"Identification of a <i>Treponema denticola</i> OppA Homologue That Binds Host Proteins Present in the Subgingival Environment","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":93,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Medical Research Council","keywords":"Treponema denticola; Biology; Microbiology; Treponema; Peptide sequence; Biochemistry; Plasmid; Molecular biology; Gene; Bacteria; Genetics; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007055489,0.00009070725,0.0001284017,0.00009160794,0.000214561,0.0000655148,0.0001412386,0.0001102937,0.0009924378],"category_scores_gemma":[0.00003654459,0.00007198006,0.00005408551,0.000145253,0.0002216336,0.0001545478,0.00005596433,0.0003173942,0.0001410774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003142829,"about_ca_system_score_gemma":0.00001531622,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00316641,"about_ca_topic_score_gemma":0.000674873,"domain_scores_codex":[0.9987349,0.0005853203,0.0002487841,0.0001510251,0.0001212564,0.0001586973],"domain_scores_gemma":[0.9994869,0.00007938706,0.00007767955,0.000313923,0.00001865536,0.00002350792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002136332,0.0009553249,0.7352406,0.0001164162,0.00005298262,0.00003941459,0.001222163,0.00004536275,0.251575,0.0000697696,0.0003906915,0.0100786],"study_design_scores_gemma":[0.000419761,0.0001148406,0.9637388,0.00001688363,0.00001015535,0.0001392773,0.0001001894,0.00005359806,0.02818302,0.00005022411,0.007095739,0.0000775072],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982141,0.000279612,0.00005046897,0.0001243613,0.0001227478,0.000415229,0.00003308274,0.00001406851,0.000746302],"genre_scores_gemma":[0.9981917,0.0006032873,0.000004958529,0.00002284584,0.00002397478,0.00006496435,0.00003147578,0.000005768768,0.001051081],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2284982,"threshold_uncertainty_score":0.9999208,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0235853029457098,"score_gpt":0.2784867670196376,"score_spread":0.2549014640739278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}