{"id":"W2149585871","doi":"10.1073/pnas.0706645104","title":"Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci","year":2007,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":219,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Université de Montréal; Hôpital Notre-Dame","funders":"Deutsche Morbus Crohn/Colitis Ulcerosa Vereinigung; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft; European Commission; Crohn's and Colitis Foundation","keywords":"Biology; Genetics; Haplotype; Locus (genetics); Genome-wide association study; Genome; Allele; Founder effect; Gene; Population; Disease; Candidate gene; Genetic association; Single-nucleotide polymorphism; Genotype; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002661082,0.00009082803,0.00007942983,0.00009474343,0.0002136199,0.0000485795,0.000515154,0.00005585873,0.000002198983],"category_scores_gemma":[0.003223483,0.00006215323,0.00008942855,0.0002710139,0.0001528327,0.00005277315,0.00008041547,0.00006285076,4.277077e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007482948,"about_ca_system_score_gemma":0.00005698048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005166883,"about_ca_topic_score_gemma":0.00004009524,"domain_scores_codex":[0.9984404,0.00002169236,0.0003238664,0.0002418886,0.0008044577,0.0001677262],"domain_scores_gemma":[0.9991058,0.0001357821,0.0003857489,0.00001822181,0.0003060205,0.00004844976],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002461221,0.0001545121,0.9791168,0.00004484136,0.00001798679,9.618809e-8,0.0001686464,0.0003608911,0.01914788,0.00050926,0.0002159087,0.00001705697],"study_design_scores_gemma":[0.0003766721,0.00001462388,0.9912009,0.00001098116,0.00002955969,6.389579e-8,0.0003998932,0.000182451,0.002680845,0.00495977,0.00006774555,0.00007648145],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982516,0.0000411629,0.00001093473,0.0007895134,0.00002066406,0.0007824915,0.00003530579,0.000004441888,0.00006393305],"genre_scores_gemma":[0.9992953,0.000002975461,0.00006067647,0.0002954835,0.0001001885,0.00004708566,0.00000966856,0.000005168558,0.000183442],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01646703,"threshold_uncertainty_score":0.3859043,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02483676803751148,"score_gpt":0.3045876813948586,"score_spread":0.2797509133573471,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}