{"id":"W2149607250","doi":"10.1093/oxfordjournals.molbev.a004084","title":"Hyaloraphidium curvatum: A Linear Mitochondrial Genome, tRNA Editing, and an Evolutionary Link to Lower Fungi","year":2002,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Université de Montréal","keywords":"Biology; Mitochondrial DNA; Transfer RNA; Genetics; Gene; Ribosomal RNA; Genome; Group I catalytic intron; Mitochondrion; Codon usage bias; Nuclear gene; RNA; RNA splicing","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001015325,0.0002245434,0.0001888662,0.0000875974,0.0002233417,0.00001462478,0.0001184076,0.0002877518,0.0000136049],"category_scores_gemma":[0.00006099361,0.0002249647,0.00006425659,0.0001020721,0.0001919885,0.000002848179,0.0001844546,0.0001112106,0.00001389866],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000147149,"about_ca_system_score_gemma":0.00001599029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002791371,"about_ca_topic_score_gemma":0.0000190299,"domain_scores_codex":[0.9986852,0.0001000351,0.0002120636,0.0005931084,0.00006472748,0.00034481],"domain_scores_gemma":[0.9993805,0.000007973185,0.00006237514,0.000281127,0.00009411065,0.0001738814],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000947797,0.0000599771,0.006188761,0.000008668339,0.00007465003,0.000005161158,0.0000664738,0.00006582944,0.9902372,0.0007433564,0.0008587642,0.001596327],"study_design_scores_gemma":[0.006797385,0.01553074,0.4534718,0.00007659488,0.0004494019,0.0004857123,0.0003144406,0.006372978,0.05604877,0.01486177,0.441877,0.003713377],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9719859,0.01712874,0.008698716,0.0008671584,0.0005996769,0.0002796055,0.00006576558,0.0000129232,0.0003614554],"genre_scores_gemma":[0.9924052,0.0007738964,0.004688556,0.0004688414,0.001331237,0.0000372433,0.0001045454,0.0000231347,0.0001673308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9341885,"threshold_uncertainty_score":0.9173793,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007999750694851693,"score_gpt":0.238277032569477,"score_spread":0.2302772818746253,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}