{"id":"W2150166524","doi":"10.1128/jvi.77.2.989-998.2003","title":"Increased Mucosal Transmission but Not Enhanced Pathogenicity of the CCR5-Tropic, Simian AIDS-Inducing Simian/Human Immunodeficiency Virus SHIV <sub>SF162P3</sub> Maps to Envelope gp120","year":2002,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; National Center for Research Resources; Medical Research Council; Medical Research Council Canada; Canadian Foundation for AIDS Research","keywords":"Biology; Virology; Virus; Viremia; Simian immunodeficiency virus; Virulence; Viral envelope; Viral load; Glycoprotein; Microbiology; Immunology; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006370942,0.0003328404,0.0007575034,0.0003406991,0.0004502211,0.00001701777,0.0007722908,0.0005307722,0.0007572007],"category_scores_gemma":[0.0002695544,0.0002247403,0.0004340289,0.0002977898,0.0003503883,0.0001322293,0.0001607721,0.001232491,0.0003167536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001662375,"about_ca_system_score_gemma":0.0001667436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001598456,"about_ca_topic_score_gemma":0.00008457535,"domain_scores_codex":[0.9966158,0.001028173,0.001016754,0.000366568,0.0002080338,0.0007647121],"domain_scores_gemma":[0.9982824,0.0002912898,0.0005673973,0.0004945527,0.0002114883,0.0001528423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008317228,0.0007903085,0.0008896451,0.00001838244,0.0002817269,0.00008356826,0.0009556614,0.00004097004,0.9706821,0.00004552025,0.0005650261,0.02481532],"study_design_scores_gemma":[0.003550786,0.00251475,0.03147295,0.00006670439,0.0001326352,0.0002972953,0.0001019448,0.000006602196,0.9591176,0.00008272085,0.00245703,0.0001990147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948834,0.001957908,0.0007669292,0.001186654,0.0003628874,0.0003443952,0.0001200249,0.00001787545,0.0003598784],"genre_scores_gemma":[0.9985873,0.0004237842,0.0002022715,0.000459719,0.00006736659,0.00001251485,0.00001847053,0.00002864101,0.0001999158],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0305833,"threshold_uncertainty_score":0.9164644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01654241566482201,"score_gpt":0.242511309194132,"score_spread":0.22596889352931,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}