{"id":"W2150287213","doi":"10.1017/s0024282904014501","title":"Group I intron-like insertions in SSU rDNA of <b><i>Cladonia gracilis</i></b> and <b><i>C. rangiferina</i></b>","year":2004,"lang":"en","type":"article","venue":"The Lichenologist","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Intron; Biology; Cladonia; Phylogenetic tree; Monophyly; Genetics; Group I catalytic intron; Evolutionary biology; Gene; RNA; Botany; Clade; RNA splicing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002367138,0.0001207232,0.0001424172,0.00008063688,0.00008901777,0.0000215185,0.0002640715,0.0001263753,0.00001170358],"category_scores_gemma":[0.0001263434,0.00008982072,0.00004501619,0.0001950597,0.0003638459,0.0000083015,0.0001809604,0.0002291441,0.00001439971],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002837004,"about_ca_system_score_gemma":0.00004760048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007779526,"about_ca_topic_score_gemma":0.00171376,"domain_scores_codex":[0.9991499,0.000069918,0.0002052258,0.0002273953,0.00009880687,0.0002487668],"domain_scores_gemma":[0.9994895,0.00003607421,0.00005400317,0.0003236715,0.00005219093,0.00004449585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003737281,0.0001990482,0.00512862,0.00002430416,0.00004948662,0.000008832587,0.0001980959,0.0001069037,0.9883132,0.003454012,0.0007713226,0.001372427],"study_design_scores_gemma":[0.008331662,0.003107159,0.1244258,0.0002061436,0.0001108136,0.0006091929,0.003670674,0.0001904376,0.6766322,0.007910361,0.1734966,0.001308838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994962,0.001560457,0.000389198,0.001207923,0.00009167229,0.0001812097,0.00002935761,0.00001412863,0.001563997],"genre_scores_gemma":[0.9982325,0.000814127,0.0002384063,0.0002110848,0.00006438638,0.00003852682,0.00006034501,0.00001085521,0.0003297204],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.311681,"threshold_uncertainty_score":0.3662783,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01209425619249007,"score_gpt":0.258410091783673,"score_spread":0.2463158355911829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}