{"id":"W2150577437","doi":"10.1038/sj.bjc.6605338","title":"COGENT (COlorectal cancer GENeTics): an international consortium to study the role of polymorphic variation on the risk of colorectal cancer","year":2009,"lang":"en","type":"article","venue":"British Journal of Cancer","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Cancer Care Ontario; University of Ottawa; University of Toronto; Ontario Institute for Cancer Research","funders":"Instituto de Salud Carlos III; Universität Greifswald; Xunta de Galicia; Deutsche Krebshilfe; Siemens; Bundesministerium für Bildung und Forschung; Associazione Italiana per la Ricerca sul Cancro; Fonds NutsOhra; Grantová Agentura České Republiky; European Commission; Fondazione Italiana per la Ricerca sul Cancro; Vetenskapsrådet; Ontario Institute for Cancer Research; National Health and Medical Research Council; Cancer Research UK; Universidad del Tolima; Swedish Cancer Foundation; National Cancer Institute; KWF Kankerbestrijding; Ministry of Cultural Affairs; Genome Canada","keywords":"Penetrance; Colorectal cancer; Cancer genetics; Multifactorial Inheritance; Cancer; Genetics; Inheritance (genetic algorithm); Human genetics; Biology; Genetic variants; Medicine; Oncology; Bioinformatics; Single-nucleotide polymorphism; Genotype; Gene; Phenotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02843099,0.001482014,0.001996353,0.006815493,0.001928672,0.002851593,0.002660228,0.002625887,0.005703879],"category_scores_gemma":[0.0259464,0.0005844,0.001049193,0.01034834,0.001834633,0.001154801,0.007912103,0.002757628,0.001405046],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002071728,"about_ca_system_score_gemma":0.01571411,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01515481,"about_ca_topic_score_gemma":0.01212801,"domain_scores_codex":[0.987801,0.006752457,0.0005879392,0.001310682,0.002206835,0.001341126],"domain_scores_gemma":[0.9613813,0.007870441,0.004867208,0.004248178,0.007166812,0.01446605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.01237968,0.001645126,0.2720685,0.001978933,0.001975461,0.002533725,0.002383051,0.002563413,0.009902183,0.02212286,0.181116,0.489331],"study_design_scores_gemma":[0.006040907,0.00271475,0.5492736,0.001091055,0.001745108,0.003777594,0.0007731639,0.002964668,0.003086901,0.01082692,0.4174937,0.0002117158],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.4465125,0.1039546,0.1147405,0.09510741,0.009652862,0.02843967,0.07955655,0.005237607,0.1167984],"genre_scores_gemma":[0.5048762,0.02728092,0.2806896,0.01878156,0.006021234,0.02797779,0.1025986,0.001864803,0.02990928],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02843099,"threshold_uncertainty_score":0.1503592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01633299965688781,"score_gpt":0.3029934303844429,"score_spread":0.2866604307275551,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}