{"id":"W2150712894","doi":"10.1371/journal.pone.0057543","title":"Next Generation Sequencing Reveals the Expression of a Unique miRNA Profile in Response to a Gram-Positive Bacterial Infection","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"Teagasc; Norges Forskningsråd; Universitetet i Oslo; Norwegian Sequencing Centre","keywords":"Biology; microRNA; Streptococcus uberis; Innate immune system; Gene expression profiling; Gene expression; Regulation of gene expression; Gene; Genetics; Computational biology; Immune system; Streptococcus; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002455424,0.0002200748,0.0003682753,0.0003572338,0.0001868166,0.0004450746,0.0001104418,0.0005071389,0.0005154455],"category_scores_gemma":[0.0005383734,0.0001676174,0.0003287792,0.0003744892,0.0001332796,0.0001844323,0.000201337,0.0004097073,0.000440099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001892305,"about_ca_system_score_gemma":0.0001306944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006567733,"about_ca_topic_score_gemma":0.001178786,"domain_scores_codex":[0.9997603,0.0000269649,0.00001624069,0.00008066801,0.00008184166,0.00003393924],"domain_scores_gemma":[0.9997553,0.00008040371,0.00007457745,0.00001496921,0.00004814003,0.00002653203],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001599663,0.00001307942,0.004059472,0.00009931721,0.0000230638,0.0000979656,0.00008081827,0.0002154163,0.9902933,0.00006411924,0.0001500312,0.004743448],"study_design_scores_gemma":[0.00002141727,0.0006569593,0.3282843,0.00008321508,0.0002129875,0.002001458,0.0003828883,0.01349258,0.6366173,0.0007651885,0.0174163,0.00006537097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.976526,0.003944754,0.01383035,0.0001792644,0.00007461536,0.00002755944,0.003406825,0.0002607065,0.001749935],"genre_scores_gemma":[0.950964,0.002480729,0.03622117,0.0005822699,0.00003950959,0.00006512005,0.006980229,0.0001027145,0.002564146],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006567733,"threshold_uncertainty_score":0.001724303,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03882511513186003,"score_gpt":0.2449011466770106,"score_spread":0.2060760315451506,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}