{"id":"W2150911820","doi":"10.1093/gbe/evv152","title":"Multilevel Selection Theory and the Evolutionary Functions of Transposable Elements: Fig. 1.—","year":2015,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Evolutionary biology; Transposable element; Extant taxon; Natural selection; Selection (genetic algorithm); Human evolutionary genetics; Genome; Disruptive selection; Clade; Directional selection; Genetic algorithm; Genetics; Phylogenetics; Genetic variation; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004411819,0.00006580003,0.00009448425,0.000008913076,0.0002470338,0.000005259653,0.00004751349,0.00007928226,0.00009495535],"category_scores_gemma":[0.00005640314,0.00002418012,0.00002797031,0.0001165373,0.0002186681,0.00004804232,0.00002434199,0.00005320862,0.000007021677],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001931232,"about_ca_system_score_gemma":0.0000131146,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001096649,"about_ca_topic_score_gemma":0.0001661044,"domain_scores_codex":[0.9993583,0.0001905736,0.000148686,0.0001436419,0.00004303826,0.0001157888],"domain_scores_gemma":[0.9996592,0.0001432348,0.00005606021,0.00002556941,0.0000715577,0.00004436357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0016091,0.0002501195,0.5322622,0.00001803419,0.0001740892,2.432801e-7,0.001229394,0.0001334215,0.19859,0.237635,0.0004026834,0.02769574],"study_design_scores_gemma":[0.0009341724,0.0003540721,0.904132,0.000004649449,0.00005209682,0.00001972426,0.0006335181,0.001457711,0.00008209844,0.08225503,0.009969354,0.0001055517],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954383,0.002263821,0.0007363503,0.0007856965,0.000103052,0.0001864365,0.0001055651,0.00002064221,0.0003601801],"genre_scores_gemma":[0.9991722,0.00009080423,0.0001440864,0.00004268393,0.0001173294,0.00002169325,0.00009780752,4.036967e-7,0.0003130481],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3718698,"threshold_uncertainty_score":0.1900009,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01662164798933599,"score_gpt":0.2158943180167638,"score_spread":0.1992726700274278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}