{"id":"W2150929242","doi":"10.1111/1462-2920.13121","title":"Cultivating microbial dark matter in benzene‐degrading methanogenic consortia","year":2015,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Government of Canada; Government of Ontario; Joint Genome Institute; Genome Canada; U.S. Department of Energy","keywords":"Biology; Metagenomics; 16S ribosomal RNA; Pyrosequencing; Population; Microbiology; Bacteria; Biochemistry; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006351937,0.0005725793,0.0003774957,0.0003193722,0.000326344,0.0006090155,0.0003218883,0.0002613951,0.0004589779],"category_scores_gemma":[0.0008408793,0.000211366,0.0002998987,0.0002740747,0.0002150531,0.0004857231,0.001004461,0.0003336454,0.000301704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001975778,"about_ca_system_score_gemma":0.0004416599,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009617552,"about_ca_topic_score_gemma":0.001851353,"domain_scores_codex":[0.9995087,0.00009783122,0.00004119011,0.0001513366,0.0001211685,0.00007968518],"domain_scores_gemma":[0.9996827,0.0000995037,0.00005094497,0.00004184796,0.00005732553,0.00006774635],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001102,0.0000721554,0.003925222,0.00005441545,0.00001092213,0.00003183401,0.00004961174,0.00007914751,0.9914041,0.00001884467,0.00001426072,0.004229366],"study_design_scores_gemma":[0.00003061282,0.001205669,0.03990569,0.00002926111,0.00006733533,0.0002233016,0.0002694019,0.002037306,0.9539346,0.0001173518,0.002160278,0.00001925835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952552,0.0005063978,0.003507945,0.00005305172,0.00001754861,0.00004963391,0.0001848254,0.00003151864,0.0003938401],"genre_scores_gemma":[0.9684622,0.001066756,0.02747684,0.0000969778,0.00004791245,0.0001501446,0.001172371,0.00003486377,0.001492],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009617552,"threshold_uncertainty_score":0.003359258,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01359539201620976,"score_gpt":0.2131910908807482,"score_spread":0.1995956988645385,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}