{"id":"W2151026417","doi":"10.1128/iai.73.11.7161-7169.2005","title":"Analysis of the Contribution of <i>Salmonella</i> Pathogenicity Islands 1 and 2 to Enteric Disease Progression Using a Novel Bovine Ileal Loop Model and a Murine Model of Infectious Enterocolitis","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":172,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of British Columbia","funders":"","keywords":"Biology; Salmonella; Microbiology; Enterocolitis; Enterobacteriaceae; Pathogenicity; Virology; Enteric virus; Pathogenicity island; Animal model; Bacteria; Escherichia coli; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002573967,0.0001011308,0.0002968362,0.00004288584,0.0001145101,0.000008113303,0.00004679283,0.00006352079,0.000006861368],"category_scores_gemma":[0.00008610269,0.00004465032,0.00009233594,0.0003388615,0.0001119791,0.00007578337,0.0001414422,0.0000758891,3.915282e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001663321,"about_ca_system_score_gemma":0.00000810661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008754572,"about_ca_topic_score_gemma":0.0006342845,"domain_scores_codex":[0.9992391,0.0001203425,0.000295607,0.000148935,0.00007921126,0.0001168271],"domain_scores_gemma":[0.9994593,0.00006691408,0.0002126825,0.00006897941,0.0001148879,0.00007725531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001555136,0.0001803893,0.5906594,0.0000131829,0.00005575811,3.340265e-8,0.00009826582,0.002976859,0.4020306,0.00002701375,0.000001097225,0.003801846],"study_design_scores_gemma":[0.0002858475,0.0001859977,0.7727429,0.00003010781,0.0002132061,0.000004474109,0.00001482677,0.2240824,0.002294616,0.00006938219,0.0000119832,0.00006424047],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983195,0.000140581,0.001085703,0.00007530147,0.00001727614,0.0002109274,0.0001237826,0.000009624876,0.00001728697],"genre_scores_gemma":[0.9996452,0.0001741361,0.00004926823,0.00008136186,0.00001440283,0.000007794227,0.00002116789,7.840933e-7,0.000005929313],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.399736,"threshold_uncertainty_score":0.1820787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02414041321658778,"score_gpt":0.2651061691007537,"score_spread":0.2409657558841659,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}