{"id":"W2151091336","doi":"10.1111/j.1574-6968.2002.tb11051.x","title":"Diversity and phylogenetic analysis of bacteria in the mucosa of chicken ceca and comparison with bacteria in the cecal lumen","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Bacteria; Microbiology; 16S ribosomal RNA; Phylogenetic tree; Ribosomal RNA; Intestinal mucosa; Terminal restriction fragment length polymorphism; Population; Restriction fragment length polymorphism; Genetics; Polymerase chain reaction; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001221118,0.0002216794,0.0002273928,0.0008912299,0.0003171678,0.0003304197,0.00008898728,0.0002353199,0.0003547132],"category_scores_gemma":[0.0003544117,0.0001405341,0.0001656438,0.0003930782,0.0001639161,0.00015815,0.0002293112,0.0001706164,0.0002345212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009624309,"about_ca_system_score_gemma":0.0001216576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001774088,"about_ca_topic_score_gemma":0.001733039,"domain_scores_codex":[0.999864,0.00002280335,0.00001331283,0.0000441856,0.00002421623,0.00003147946],"domain_scores_gemma":[0.9998397,0.00002582422,0.00002936035,0.00001104473,0.00004836475,0.00004573863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002225791,0.00003358065,0.04463396,0.00008893807,0.00001845584,0.0002080143,0.0004586125,0.0000971124,0.9435061,0.00004292691,0.00002688999,0.01066285],"study_design_scores_gemma":[0.00001055964,0.0008162754,0.9274333,0.00005870382,0.00007198828,0.002402297,0.0008276473,0.00111536,0.06484373,0.00008151571,0.00231952,0.00001913747],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986432,0.0004680039,0.0004220334,0.00001419999,0.000002129098,0.000009311141,0.0001325423,0.000003054868,0.0003056229],"genre_scores_gemma":[0.9952455,0.0005247924,0.002896131,0.00002433522,0.000006394252,0.0000183702,0.0006493963,0.000004477035,0.0006305273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001774088,"threshold_uncertainty_score":0.003527522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01297389745063619,"score_gpt":0.2188736257147393,"score_spread":0.2058997282641031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}