{"id":"W2151187587","doi":"10.1128/ec.3.1.157-169.2004","title":"A Non-Long Terminal Repeat Retrotransposon Family Is Restricted to the Germ Line Micronucleus of the Ciliated Protozoan <i>Tetrahymena thermophila</i>","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; York University","funders":"Canadian Institutes of Health Research; York University","keywords":"Biology; Macronucleus; Retrotransposon; Retroposon; Tetrahymena; Genetics; Transposable element; Long terminal repeat; Genome; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001571576,0.0002532758,0.0002861252,0.00008514735,0.0003480524,0.0000188731,0.0004892339,0.0002227647,0.0001205106],"category_scores_gemma":[0.00007741223,0.0001556565,0.0001857421,0.0005428254,0.0002370007,0.00004038172,0.00008993995,0.0004637875,0.0003468114],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009766448,"about_ca_system_score_gemma":0.0002056524,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006603518,"about_ca_topic_score_gemma":0.00006533293,"domain_scores_codex":[0.9985502,0.000111036,0.000456559,0.0003489337,0.00008731162,0.0004459194],"domain_scores_gemma":[0.9987352,0.0001345903,0.0001696416,0.0007901199,0.0001296838,0.00004073632],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004218682,0.001224368,0.06147343,0.0001009312,0.0001801778,0.0000802068,0.003264369,0.0006128937,0.9242803,0.0001187048,0.007177366,0.001065328],"study_design_scores_gemma":[0.001896778,0.0005851233,0.6227522,0.0001603927,0.0001499284,0.0001263565,0.00008955095,0.000006861538,0.3718749,0.00009429781,0.002027882,0.0002356383],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905471,0.0005355787,0.000278355,0.001186937,0.0007605709,0.00157536,0.00009664276,0.00005142012,0.004968091],"genre_scores_gemma":[0.9969276,0.00005550104,0.000110256,0.001227628,0.0000651323,0.00006554151,0.00002903238,0.00002744571,0.001491925],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5612788,"threshold_uncertainty_score":0.6347488,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008820361351160913,"score_gpt":0.2220519428406081,"score_spread":0.2132315814894472,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}