{"id":"W2151235478","doi":"10.1186/1471-2164-14-750","title":"Heterogeneity in the entire genome for three genotypes of peach [Prunus persica (L.) Batsch] as distinguished from sequence analysis of genomic variants","year":2013,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Postharvest Quality and Shelf Life Management","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Clemson University; National Institute of Food and Agriculture; Consejo Nacional de Ciencia y Tecnología; University of California, Davis; McGill University; U.S. Department of Agriculture","keywords":"Biology; Prunus; Indel; Genome; Genetics; Reference genome; Introgression; Whole genome sequencing; Cultivar; Genotype; Single-nucleotide polymorphism; Gene; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001383907,0.0001486496,0.0001705067,0.0006223476,0.0001969734,0.0003147709,0.000137005,0.0002801853,0.0008464003],"category_scores_gemma":[0.0004572632,0.00008644654,0.0002902101,0.0006016149,0.0001543635,0.0001208427,0.0001912904,0.0002627774,0.0001858074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002324813,"about_ca_system_score_gemma":0.0001448783,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001611911,"about_ca_topic_score_gemma":0.004191618,"domain_scores_codex":[0.9998109,0.00001752705,0.00001239114,0.0001095778,0.00003359618,0.00001602679],"domain_scores_gemma":[0.9997215,0.00009956035,0.00007903681,0.00002286913,0.00003925358,0.00003788287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004661965,0.00003607436,0.03950474,0.0001491398,0.0000940127,0.0001640912,0.0004472533,0.0003638421,0.9486526,0.0001345118,0.00007112997,0.009916411],"study_design_scores_gemma":[0.00001927835,0.0002863576,0.9318347,0.00002064334,0.0002132165,0.001069299,0.0002683506,0.002364462,0.06118401,0.0001595642,0.002559953,0.00002017768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964288,0.0002185844,0.001492432,0.00001821551,0.000002789746,0.00001293943,0.001341923,0.00002621775,0.0004581556],"genre_scores_gemma":[0.9930334,0.00009026309,0.002521334,0.00002626548,0.000002467675,0.00001757928,0.003890072,0.00001487708,0.0004036615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001611911,"threshold_uncertainty_score":0.003205001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07288751504140199,"score_gpt":0.2668607338995566,"score_spread":0.1939732188581546,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}