{"id":"W2151427720","doi":"10.1093/jac/dks287","title":"Increase in transmitted HIV drug resistance among persons undergoing genotypic resistance testing in Ontario, Canada, 2002-09","year":2012,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital; Health Sciences Centre; Sunnybrook Health Science Centre; Toronto Public Health; Public Health Agency of Canada; St. Michael's Hospital; Canadian AIDS Treatment Information Exchange; Ontario HIV Treatment Network; Public Health Ontario; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"Medicine; HIV drug resistance; Drug resistance; Resistance mutation; Internal medicine; Genotype; Population; Cohort; Virology; Record linkage; Human immunodeficiency virus (HIV); Reverse transcriptase; Viral load; Antiretroviral therapy; Biology; Polymerase chain reaction; Genetics; Environmental health","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003946683,0.0002371771,0.0002888947,0.0009004943,0.001572637,0.0008688867,0.001050283,0.0004110391,0.001649054],"category_scores_gemma":[0.002006061,0.0002936675,0.0003954654,0.002152305,0.0005982784,0.0003582959,0.000566913,0.0005947205,0.0001347361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.02036183,"about_ca_system_score_gemma":0.01895624,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9923835,"about_ca_topic_score_gemma":0.9947187,"domain_scores_codex":[0.9989265,0.00006028408,0.00006277012,0.0001386768,0.0005112066,0.0003005954],"domain_scores_gemma":[0.9975675,0.0001016595,0.0006838875,0.00005021976,0.001093006,0.000503677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004052413,0.00001367184,0.9953753,0.00003094032,0.00002173949,0.0001122241,0.0004917409,0.00006313583,0.0001954273,0.00003072995,0.0007610434,0.002863497],"study_design_scores_gemma":[0.000002911451,0.00000966769,0.9991683,0.00001168494,0.000006921837,0.00005821585,0.0003249975,0.00009160404,0.00002733249,0.00000319189,0.0002926042,0.000002487879],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905574,0.0007021567,0.0001216854,0.0005275804,0.00001321757,0.00004709395,0.005769107,0.00001958508,0.002242076],"genre_scores_gemma":[0.9974597,0.000350592,0.0001389908,0.0001182406,0.000007997751,0.00001186203,0.00118082,0.000003986384,0.0007278654],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02036183,"threshold_uncertainty_score":0.1477361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009791156206794814,"score_gpt":0.2113288963749749,"score_spread":0.2015377401681801,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}