{"id":"W2151972914","doi":"10.1099/vir.0.19612-0","title":"Topogenesis in membranes of the NTB–VPg protein of Tomato ringspot nepovirus: definition of the C-terminal transmembrane domain","year":2004,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transmembrane domain; Amino acid; Transmembrane protein; Nepovirus; Biochemistry; C-terminus; Membrane topology; Endoplasmic reticulum; Membrane protein; Membrane; RNA; Gene; Receptor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001064212,0.0003423711,0.0001580463,0.0001776636,0.0002932249,0.0003314932,0.0001384574,0.0004210927,0.0005068043],"category_scores_gemma":[0.0001305836,0.0001611123,0.0002959673,0.000117986,0.0002238211,0.0003979,0.0003040261,0.0004686069,0.0004872653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004792609,"about_ca_system_score_gemma":0.0002114083,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008893768,"about_ca_topic_score_gemma":0.0006455997,"domain_scores_codex":[0.9999102,0.00001686776,0.000004562221,0.00003129383,0.0000214646,0.00001565153],"domain_scores_gemma":[0.9999399,0.000006521974,0.00001501662,0.000005975381,0.000009422809,0.00002309757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002545763,0.0000032844,0.0001303979,0.00002112354,0.000002671992,0.00007149505,0.00001881313,0.0000186632,0.9994366,0.0001057723,0.000009863254,0.0001559571],"study_design_scores_gemma":[0.00002329165,0.000159723,0.02285021,0.00003249485,0.00002888179,0.001860556,0.000165705,0.002004761,0.9652151,0.0003690451,0.007278418,0.00001183751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993814,0.001505269,0.003162907,0.0001735324,0.00002236353,0.00001973729,0.0002257413,0.00003119174,0.001045285],"genre_scores_gemma":[0.9927873,0.0008861764,0.002936189,0.00007634988,0.00001255242,0.00002722565,0.001208773,0.00001803495,0.002047502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008893768,"threshold_uncertainty_score":0.003477335,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02533680542743341,"score_gpt":0.2365273395636692,"score_spread":0.2111905341362358,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}