{"id":"W2152081264","doi":"10.1128/jcm.02443-12","title":"Mycobacterial Interspersed Repetitive-Unit–Variable-Number Tandem-Repeat (MIRU-VNTR) Genotyping of Mycobacterium intracellulare for Strain Comparison with Establishment of a PCR-Based Database","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Disease Control Laboratory","funders":"bioMérieux; Amon G. Carter Foundation","keywords":"Variable number tandem repeat; Biology; Genotyping; Pulsed-field gel electrophoresis; Multiplex polymerase chain reaction; Genotype; Tandem repeat; Genetics; Population; Amplicon; Polymerase chain reaction; Gene; Medicine; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008936716,0.0003588748,0.0005534025,0.001089496,0.0001939964,0.0002984998,0.0002814332,0.0003329441,0.0005939317],"category_scores_gemma":[0.001660537,0.0001593471,0.0002913662,0.0004856134,0.0001620835,0.0002550533,0.0002905598,0.000279282,0.0003731905],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001154512,"about_ca_system_score_gemma":0.0001648739,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002968515,"about_ca_topic_score_gemma":0.0004718286,"domain_scores_codex":[0.9989884,0.0003640804,0.0001521585,0.0002050311,0.0002207939,0.00006940019],"domain_scores_gemma":[0.9993787,0.0002330858,0.0001303926,0.0001070327,0.0001065616,0.00004428587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006412518,0.0004200277,0.1468782,0.0002003142,0.00007106087,0.0005767451,0.0004041684,0.0007421504,0.7844321,0.0002525157,0.0002676409,0.06511389],"study_design_scores_gemma":[0.00009880253,0.003320383,0.6006341,0.000148872,0.0001999123,0.00662932,0.000413213,0.009619846,0.3710286,0.000568378,0.00729292,0.00004559945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9766831,0.0008199289,0.02064981,0.0000517921,0.00001915515,0.0001774752,0.0006575449,0.00007870953,0.000862473],"genre_scores_gemma":[0.9293449,0.0004245189,0.06773887,0.00007462382,0.0000238874,0.0002370776,0.001679719,0.00003916635,0.0004371254],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.001089496,"threshold_uncertainty_score":0.004726231,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07483364884792523,"score_gpt":0.3919459755391528,"score_spread":0.3171123266912276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}