{"id":"W2152157708","doi":"10.1093/hmg/ddq307","title":"A genome-wide scan for common alleles affecting risk for autism","year":2010,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"Autism Spectrum Disorder Research","field":"Neuroscience","cited_by":588,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; McMaster University; McGill University; Concordia University; Centre for Addiction and Mental Health; Memorial University of Newfoundland; Holland Bloorview Kids Rehabilitation Hospital; University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Neurological Disorders and Stroke; National Cancer Institute; National Institute on Drug Abuse; National Institute of Mental Health; National Institute on Alcohol Abuse and Alcoholism; Ontario Ministry of Research and Innovation; Medical Research Council; Canadian Institutes of Health Research; Fondation de France; Hospital for Sick Children; Ministero della Salute; Institut National de la Santé et de la Recherche Médicale; Ontario Genomics Institute; National Human Genome Research Institute; Fondation Orange; National Institutes of Health; Ontario Genomics; Fondation FondaMental; Koninklijke Nederlandse Akademie van Wetenschappen; Ontario Innovation Trust; Howard Hughes Medical Institute; Hussman Foundation; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Wellcome Trust; Genome Canada; Health Research Board; Deutsche Forschungsgemeinschaft; GlaxoSmithKline; University of Toronto; Autism Speaks; Sick Kids Foundation; Johns Hopkins University","keywords":"Biology; Genetics; Single-nucleotide polymorphism; Autism; Genome-wide association study; Genetic association; Allele; SNP; Genotype; Minor allele frequency; Sample size determination; Allele frequency; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003932304,0.0002451647,0.0002448242,0.00015545,0.0007639189,0.0001648723,0.0006826174,0.0001441114,0.00005128793],"category_scores_gemma":[0.0005554978,0.0002707624,0.0001981799,0.0001710926,0.0002119785,0.00004067304,0.0002154576,0.0004332728,0.00002180284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003592713,"about_ca_system_score_gemma":0.00006798234,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003199219,"about_ca_topic_score_gemma":0.0004629108,"domain_scores_codex":[0.9978009,0.000131816,0.0002879111,0.0006624896,0.0003486934,0.0007682104],"domain_scores_gemma":[0.9985281,0.0004175686,0.0001591876,0.0006994678,0.00002180479,0.0001738903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001977829,0.00008629783,0.001834342,0.00004501547,0.00001295821,0.00001092901,0.0002831195,0.0001762847,0.9724266,0.02333656,0.00005592974,0.001712194],"study_design_scores_gemma":[0.001999017,0.0007762331,0.08451927,0.00001321624,0.00006986355,0.00001927987,0.00003864717,0.005556711,0.7306952,0.1605785,0.01504414,0.0006899187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9627213,0.0001875706,0.03347422,0.0005632918,0.0001466395,0.00189552,0.00006736709,0.0001160235,0.0008280021],"genre_scores_gemma":[0.9924828,0.00003968655,0.006585093,0.0002426771,0.00006748116,0.0002590456,0.00002067617,0.0001185662,0.0001839381],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2417314,"threshold_uncertainty_score":0.9999744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02802778937418315,"score_gpt":0.3191625011452157,"score_spread":0.2911347117710325,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}