{"id":"W2152186046","doi":"10.1128/aem.02591-09","title":"Correlation of the Capsular Phenotype in <i>Propionibacterium freudenreichii</i> with the Level of Expression of <i>gtf</i> , a Unique Polysaccharide Synthase-Encoding Gene","year":2010,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Phenotype; Propionibacterium freudenreichii; Biology; Correlation; Gene; Genetics; Gene expression; Computational biology; Molecular biology; Bacteria; Mathematics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008437323,0.00008166216,0.0001060376,0.00001659629,0.00003480163,0.00000158888,0.00009679369,0.0001048811,0.00001069195],"category_scores_gemma":[0.000004212841,0.00004929929,0.00002103791,0.00003755487,0.0002596779,0.000003304354,0.00008421364,0.0000978418,2.684047e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000369036,"about_ca_system_score_gemma":0.00001208675,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001618847,"about_ca_topic_score_gemma":0.0000205163,"domain_scores_codex":[0.9995416,0.00003226599,0.0001634604,0.0001578452,0.00002838801,0.00007637257],"domain_scores_gemma":[0.9996093,0.000007621419,0.0001718385,0.0001937094,0.000005878926,0.00001163097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005832611,0.00004865339,0.007701633,0.00001104254,0.00000770519,5.354878e-8,0.0001289964,0.00003665658,0.9917988,0.00005551879,0.00001302818,0.0001395648],"study_design_scores_gemma":[0.0002881093,0.00004557233,0.02060338,0.000008560921,0.000009953299,0.00001146621,0.0001241269,0.00000406981,0.9784846,0.000008912457,0.0003555063,0.0000557326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989273,0.00006179134,0.0005945186,0.00008232129,0.00006073874,0.000166243,0.00006917252,0.000001241269,0.00003669479],"genre_scores_gemma":[0.9994596,0.00006932026,0.0002103277,0.00007863434,0.0000241809,0.000008820888,0.0001081035,0.000007956384,0.00003309796],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01331421,"threshold_uncertainty_score":0.2010367,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005483689881408645,"score_gpt":0.1758084530418444,"score_spread":0.1703247631604357,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}