{"id":"W2152415629","doi":"10.1128/iai.01888-14","title":"Host Defense Peptide Resistance Contributes to Colonization and Maximal Intestinal Pathology by Crohn's Disease-Associated Adherent-Invasive Escherichia coli","year":2014,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Population Health Research Institute; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Crohn's disease; Escherichia coli; Microbiology; Disease; Colonization; Immunology; Crohn disease; Pathology; Genetics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001014215,0.000212919,0.0001628125,0.0001439496,0.00007819666,0.0002064926,0.0001066939,0.0002085985,0.0005727537],"category_scores_gemma":[0.0001367883,0.00009696392,0.0001481208,0.00008336986,0.0001790024,0.00009732306,0.0001860325,0.0003900165,0.0001730102],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009595645,"about_ca_system_score_gemma":0.00008619696,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001938064,"about_ca_topic_score_gemma":0.0001855254,"domain_scores_codex":[0.9999176,0.0000163425,0.000007236887,0.00001496108,0.00001765099,0.00002613154],"domain_scores_gemma":[0.9998827,0.00001586262,0.00003322407,0.00001280186,0.00000935418,0.00004610625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001130054,0.00003239156,0.0006560484,0.000007834588,0.000001678704,0.00006134417,0.000007588859,0.00001868085,0.9984474,0.00002147649,0.000007207271,0.0006254949],"study_design_scores_gemma":[0.00006423304,0.001569087,0.09847317,0.00001382269,0.0000477283,0.002291945,0.0001262111,0.001926499,0.8939095,0.0001476035,0.001420042,0.0000101174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993225,0.0001681644,0.0002666461,0.00002536818,0.000002601363,0.000003359935,0.00001536819,0.000007025457,0.0001888885],"genre_scores_gemma":[0.9989232,0.0001532852,0.0004553329,0.00001562824,0.000003555659,0.000003633812,0.00006335732,0.000004072045,0.0003778576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005727537,"threshold_uncertainty_score":0.001915991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00843298606251094,"score_gpt":0.2453334958683695,"score_spread":0.2369005098058586,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}