{"id":"W2152471631","doi":"10.1105/tpc.111.089102","title":"Tetrapyrrole Synthesis of Photosynthetic Chromerids Is Likely Homologous to the Unusual Pathway of Apicomplexan Parasites ","year":2011,"lang":"en","type":"article","venue":"The Plant Cell","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Akademie Věd České Republiky; King Abdullah University of Science and Technology; Grantová Agentura České Republiky; Michael Smith Health Research BC; Jihočeská Univerzita v Českých Budějovicích; Canadian Institute for Advanced Research","keywords":"Tetrapyrrole; Biology; Plastid; Apicomplexa; Heme; Photosynthesis; Apicoplast; Endosymbiosis; Phototroph; Chloroplast; Biochemistry; Botany; Gene; Plasmodium falciparum","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001851448,0.0001417853,0.000200907,0.00002783788,0.00008038121,0.000003889082,0.0004408631,0.00005746513,0.00005000185],"category_scores_gemma":[0.00002336519,0.00008200042,0.000124006,0.00006913389,0.0001635102,3.248724e-7,0.0001405156,0.00004844455,0.00001306227],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002800236,"about_ca_system_score_gemma":0.00003118169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001973031,"about_ca_topic_score_gemma":0.00006098162,"domain_scores_codex":[0.9992432,0.00005714247,0.0002154278,0.0001923937,0.00009422193,0.0001976205],"domain_scores_gemma":[0.9992688,0.00007371418,0.0001139075,0.0004646702,0.0000408618,0.00003806187],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009388232,0.0000982507,0.001674595,0.00001824699,0.0001056608,0.000001089459,0.001368154,0.00001285974,0.9950323,0.00003649023,0.0005724497,0.000986089],"study_design_scores_gemma":[0.00009071054,0.0003424115,0.01021575,0.000008942364,0.00004980266,0.00001182798,0.0003137318,0.00000931918,0.982912,0.00006293424,0.005874189,0.0001083914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941738,0.001251639,0.00002829744,0.00007831733,0.00007571483,0.0001982641,0.0003963298,0.000002144389,0.003795475],"genre_scores_gemma":[0.9990477,0.0003107548,0.0002297229,0.0001569606,0.00004551751,0.00002586842,0.000007308091,0.00001421009,0.0001619344],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01212024,"threshold_uncertainty_score":0.334388,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02221450102771863,"score_gpt":0.1999306341194356,"score_spread":0.177716133091717,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}