{"id":"W2152561300","doi":"10.1136/sextrans-2013-051229","title":"Molecular epidemiology of<i>Neisseria gonorrhoeae</i>isolates from Saskatchewan, Canada: utility of NG-MAST in predicting antimicrobial susceptibility regionally","year":2014,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Disease Control Laboratory; University of Saskatchewan","funders":"National Research Council Canada; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Neisseria gonorrhoeae; Tetracycline; Penicillin; Microbiology; Typing; Agar dilution; Antibiotic resistance; Biology; Molecular epidemiology; Medicine; Ciprofloxacin; Antibiotics; Genotype; Minimum inhibitory concentration; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003683023,0.0003117158,0.0001961236,0.001244434,0.0007753947,0.0006573046,0.000528626,0.0002258003,0.0009975719],"category_scores_gemma":[0.001189742,0.0002107345,0.0002320087,0.001941298,0.0004835989,0.0001738994,0.0004521924,0.0002827696,0.0001979319],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007087162,"about_ca_system_score_gemma":0.01066368,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9643608,"about_ca_topic_score_gemma":0.9800389,"domain_scores_codex":[0.9995161,0.00004041708,0.00004721343,0.00009507869,0.0001799873,0.0001211238],"domain_scores_gemma":[0.9985799,0.0001013085,0.0002844279,0.00004253716,0.0007722838,0.0002196147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000688833,0.00001078642,0.9896615,0.00003689963,0.00004252236,0.00008716938,0.0002482334,0.0002283188,0.004242286,0.00002418451,0.0002407554,0.00510848],"study_design_scores_gemma":[0.000003779401,0.00002211696,0.9981343,0.00002150393,0.00001570484,0.00008743272,0.0004916961,0.0002404949,0.000445481,0.000007369876,0.0005251369,0.00000506258],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962664,0.0003464289,0.0002154052,0.00009499316,0.000003630658,0.00003883127,0.001702236,0.00001122288,0.001320736],"genre_scores_gemma":[0.997127,0.0003196833,0.0006425388,0.00007865889,0.000002255908,0.00001396864,0.001315691,0.000003770708,0.0004965418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03563923,"threshold_uncertainty_score":0.07169819,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01562585385983565,"score_gpt":0.2642148445943336,"score_spread":0.2485889907344979,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}