{"id":"W2152612994","doi":"10.1128/jvi.00022-14","title":"Genome Scale Patterns of Recombination between Coinfecting Vaccinia Viruses","year":2014,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Cancer Foundation","keywords":"Biology; Vaccinia; Recombination; Virology; Genome; Genetics; Viral evolution; Scale (ratio); Gene; Recombinant DNA; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004623701,0.0002492558,0.0002379645,0.0008176831,0.0002340062,0.0006917604,0.0004512315,0.0005643347,0.0007679054],"category_scores_gemma":[0.001204145,0.0002115628,0.000275589,0.0005145457,0.0004111851,0.0003517653,0.000514896,0.0006178645,0.0003645099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000361344,"about_ca_system_score_gemma":0.0001177918,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003277898,"about_ca_topic_score_gemma":0.0003466177,"domain_scores_codex":[0.9991316,0.0001410734,0.00008416652,0.0003054471,0.0002100842,0.0001276165],"domain_scores_gemma":[0.998425,0.0006444087,0.00041291,0.0001928873,0.0002318635,0.00009295131],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001918741,0.00005612086,0.01062525,0.00008369994,0.00004129132,0.0001145993,0.0001538003,0.0002192887,0.9836425,0.0001707941,0.00005365554,0.004647248],"study_design_scores_gemma":[0.00001908023,0.0007043708,0.1563559,0.00002725896,0.000111602,0.001696899,0.000393448,0.002977428,0.8341554,0.0002718115,0.003264804,0.00002200488],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912592,0.001866399,0.005026367,0.0000373898,0.00001597538,0.00003793292,0.0002752612,0.00007208929,0.001409471],"genre_scores_gemma":[0.9942564,0.000204094,0.004397074,0.00002390262,0.000005520088,0.00002797502,0.0006239333,0.0000290953,0.000431905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008176831,"threshold_uncertainty_score":0.00262171,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01961373039244489,"score_gpt":0.2844346961047463,"score_spread":0.2648209657123013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}