{"id":"W2152672184","doi":"10.1186/gb-2013-14-8-r93","title":"Web Apollo: a web-based genomic annotation editing platform","year":2013,"lang":"en","type":"article","venue":"Genome biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":415,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Cancer Research; University of Toronto; Ontario Institute for Cancer Research","funders":"Basic Energy Sciences; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; National Human Genome Research Institute; U.S. Department of Energy","keywords":"Apollo; Biology; Annotation; Web application; World Wide Web; Computational biology; Computer science; Bioinformatics; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003818314,0.001825011,0.001039454,0.003035358,0.001407899,0.003591354,0.003907488,0.001856786,0.06289735],"category_scores_gemma":[0.008014457,0.001499943,0.001308326,0.001954082,0.0009488468,0.004082797,0.00459996,0.003858936,0.06412385],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008105804,"about_ca_system_score_gemma":0.001499686,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00187306,"about_ca_topic_score_gemma":0.002242413,"domain_scores_codex":[0.998314,0.0002412893,0.0001587249,0.0004180396,0.0007100247,0.0001578524],"domain_scores_gemma":[0.9937572,0.002381536,0.000542789,0.001491155,0.001003494,0.0008237856],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001993076,0.0003776685,0.001271079,0.001215141,0.0001624385,0.001777786,0.001007364,0.001960763,0.08257001,0.01184005,0.6462578,0.2495668],"study_design_scores_gemma":[0.0003728383,0.0001213247,0.002608292,0.000286578,0.00007989244,0.001278474,0.0002073158,0.01636175,0.05296171,0.0205785,0.9047926,0.0003507422],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002960535,0.0003226516,0.4437032,0.000789806,0.000856719,0.0005303865,0.02827498,0.5024516,0.02011016],"genre_scores_gemma":[0.03686342,0.001195786,0.5868565,0.002686261,0.0008455585,0.002265679,0.1253218,0.1665099,0.07745522],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.06289735,"threshold_uncertainty_score":0.2104126,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01170966357451649,"score_gpt":0.2255314127097195,"score_spread":0.213821749135203,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}