{"id":"W2152934249","doi":"10.1128/jcm.05122-11","title":"Five-Year Outbreak of Community- and Hospital-Acquired Mycobacterium porcinum Infections Related to Public Water Supplies","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Disease Control Laboratory","funders":"Amon G. Carter Foundation","keywords":"Outbreak; Pulsed-field gel electrophoresis; rpoB; Biology; Sputum; Microbiology; Veterinary medicine; Mycobacterium; Genotype; Virology; Medicine; Tuberculosis; Bacteria; Pathology; 16S ribosomal RNA; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003671019,0.0004101174,0.0002604632,0.000528429,0.0009423305,0.0005474903,0.0002984241,0.0006083298,0.0009320088],"category_scores_gemma":[0.001506215,0.0002923088,0.000188694,0.0004937273,0.0004419688,0.0004278939,0.000614614,0.0005291634,0.0001317427],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000762372,"about_ca_system_score_gemma":0.0003837561,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005387362,"about_ca_topic_score_gemma":0.004205354,"domain_scores_codex":[0.9995511,0.000107434,0.00003954513,0.00008181627,0.00007021929,0.0001499122],"domain_scores_gemma":[0.9992352,0.0001651574,0.0002470427,0.00004286641,0.0001017298,0.0002080754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002186686,0.000210538,0.9826332,0.00002421827,0.00004367237,0.01049304,0.0006325464,0.00018696,0.002097643,0.00003506798,0.0002547308,0.003169605],"study_design_scores_gemma":[0.00003711946,0.0007930192,0.9775854,0.00001977037,0.00004549724,0.01706381,0.001787771,0.00100408,0.0008445958,0.0000458721,0.0007547356,0.00001827878],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996982,0.00004266696,0.00006048608,0.00003175735,0.000003105128,0.000006524459,0.00002001029,0.000005125803,0.0001323217],"genre_scores_gemma":[0.9997825,0.00002498143,0.00004341831,0.00003844724,0.000008799095,0.00000250335,0.00005179111,7.381499e-7,0.0000467983],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005387362,"threshold_uncertainty_score":0.01071203,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05378701527932349,"score_gpt":0.3475818726404316,"score_spread":0.2937948573611081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}