{"id":"W2153576193","doi":"10.1128/aac.05116-11","title":"Evolution of IncA/C <i>bla</i> <sub>CMY-2</sub> -Carrying Plasmids by Acquisition of the <i>bla</i> <sub>NDM-1</sub> Carbapenemase Gene","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":143,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institut National Du Cancer; Istituto Superiore di Sanità; Ministero della Salute","keywords":"Plasmid; Klebsiella pneumoniae; Biology; Escherichia coli; Gene; Microbiology; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001735472,0.0003077131,0.0003426821,0.00004463387,0.000141568,0.00002110166,0.0003268989,0.0002891493,0.00001894398],"category_scores_gemma":[0.00001114078,0.0002616677,0.0001962533,0.0001509667,0.0003671937,0.00002063587,0.0001362111,0.0001091026,0.000002773794],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003237441,"about_ca_system_score_gemma":0.00007924461,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008700653,"about_ca_topic_score_gemma":0.00002545701,"domain_scores_codex":[0.9984186,0.00008625751,0.0004909217,0.0004746986,0.0001868795,0.0003426838],"domain_scores_gemma":[0.99888,0.000009457707,0.0004084622,0.0005000301,0.0001254443,0.00007661992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003289857,0.0002081474,0.03215272,0.00008158807,0.0001132955,0.000001387371,0.0001287692,0.000003934865,0.9572169,0.0000174391,0.008881249,0.0008655828],"study_design_scores_gemma":[0.001192923,0.0001506975,0.03664799,0.00009858868,0.00005241024,0.00001644983,0.00003979317,0.00001348213,0.9607189,0.00003882381,0.0007629567,0.0002669247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980368,0.0002367574,0.0006165365,0.0001035991,0.0002501313,0.0003377767,0.0001666809,0.00001300834,0.0002387297],"genre_scores_gemma":[0.9960893,0.002221205,0.0002376994,0.001118788,0.000126976,0.000004342671,0.0001080882,0.00005342981,0.00004011644],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008118292,"threshold_uncertainty_score":0.9999835,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00646867371068188,"score_gpt":0.1965933951738446,"score_spread":0.1901247214631627,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}