{"id":"W2153781183","doi":"10.1128/mbio.00678-13","title":"Proton-Dependent Gating and Proton Uptake by Wzx Support O-Antigen-Subunit Antiport Across the Bacterial Inner Membrane","year":2013,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; University of Guelph","funders":"Canadian Institutes of Health Research; Medical Research Council; Cystic Fibrosis Canada","keywords":"Periplasmic space; Antiporter; Biophysics; Chemistry; Inner membrane; Biochemistry; Transport protein; Electrochemical gradient; Cytoplasm; Membrane; Biology; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003081512,0.0002482145,0.000207364,0.00001896058,0.000221495,0.000168231,0.0003311179,0.0004121159,0.0002761715],"category_scores_gemma":[0.00003823992,0.0001767367,0.00006013017,0.00007745156,0.0002511463,0.000008336604,0.0003803739,0.000185727,0.00004339558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007763305,"about_ca_system_score_gemma":0.00005601305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00013653,"about_ca_topic_score_gemma":0.00003741911,"domain_scores_codex":[0.9984898,0.00005140797,0.0003458794,0.0004864558,0.0001410601,0.0004853909],"domain_scores_gemma":[0.9991565,0.000005289221,0.0001513049,0.0004974706,0.00009890174,0.00009056543],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004819156,0.0000516379,0.004699002,0.00003168056,0.00004311655,0.000002137788,0.00006530864,1.706938e-7,0.9878507,0.000009160022,0.001135859,0.006063056],"study_design_scores_gemma":[0.0005032935,0.0003343413,0.004442774,0.00000703263,0.000008145224,0.00004342099,0.00008200943,0.000006461463,0.8119921,0.00002857607,0.1823357,0.000216084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961521,0.0001132187,0.0000219139,0.000985906,0.0002760056,0.002021195,0.00007988415,0.00002883698,0.000320921],"genre_scores_gemma":[0.9969777,0.0003495796,0.000195829,0.0003090812,0.0003260215,0.0004783839,0.0002715015,0.0000376434,0.001054301],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1811999,"threshold_uncertainty_score":0.7207112,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00697398210156806,"score_gpt":0.2314181845189149,"score_spread":0.2244442024173468,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}