{"id":"W2154307751","doi":"10.1371/journal.pone.0056474","title":"Dam Methylation Participates in the Regulation of PmrA/PmrB and RcsC/RcsD/RcsB Two Component Regulatory Systems in Salmonella enterica Serovar Enteritidis","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Secretaría de Ciencia y Técnica, Universidad de Buenos Aires; Universidad de Buenos Aires","keywords":"Protein Data Bank (RCSB PDB); Salmonella enterica; Biology; Serotype; Microbiology; Gene; Salmonella; Enterobacteriaceae; Gene expression; Genetics; Bacteria; Escherichia coli; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001610008,0.0004111746,0.0002669867,0.0001803694,0.0001271298,0.0002141085,0.0001767187,0.0002316899,0.0009485697],"category_scores_gemma":[0.0001814356,0.0002307851,0.0002223678,0.00007881278,0.0002328331,0.0001794188,0.0003746958,0.0002855677,0.0005157519],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002783222,"about_ca_system_score_gemma":0.0002075324,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007651676,"about_ca_topic_score_gemma":0.0008073878,"domain_scores_codex":[0.9998434,0.00002497397,0.000009773094,0.00005289767,0.00003913658,0.00002984495],"domain_scores_gemma":[0.9998642,0.00001905768,0.00004372133,0.00001701234,0.00001745279,0.00003860098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004987903,0.000006191596,0.00018514,0.00001327815,0.000001348928,0.00001838688,0.00001018901,0.00003760896,0.9992942,0.00005249212,0.00001271863,0.0003186674],"study_design_scores_gemma":[0.00001898443,0.0001340684,0.02432437,0.000009594982,0.00001525053,0.0001643162,0.00006108094,0.005316187,0.9680929,0.0001577207,0.001690431,0.00001510279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918631,0.001173752,0.005398253,0.0001202528,0.00002390506,0.00001715431,0.0003047232,0.0001981053,0.0009008783],"genre_scores_gemma":[0.9950274,0.0002701867,0.002723663,0.00004895825,0.000004919889,0.00002023032,0.0003595386,0.00003148118,0.001513699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009485697,"threshold_uncertainty_score":0.003173292,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06862167026072664,"score_gpt":0.2403289852185411,"score_spread":0.1717073149578144,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}