{"id":"W2154403718","doi":"10.1126/science.1133609","title":"The Genome of the Sea Urchin <i>Strongylocentrotus purpuratus</i>","year":2006,"lang":"en","type":"article","venue":"Science","topic":"Echinoderm biology and ecology","field":"Agricultural and Biological Sciences","cited_by":1154,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sunnybrook Health Science Centre; Simon Fraser University; University of Victoria","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Environmental Health Sciences; National Institute on Deafness and Other Communication Disorders; National Eye Institute; National Human Genome Research Institute; Biotechnology and Biological Sciences Research Council; National Center for Research Resources; National Institute of General Medical Sciences; Directorate for Biological Sciences; National Cancer Institute; National Institutes of Health","keywords":"Strongylocentrotus purpuratus; Biology; Genome; Sea urchin; Evolutionary biology; Echinoderm; Vertebrate; Genetics; Shotgun sequencing; Deuterostome; Chordate; Whole genome sequencing; Computational biology; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005469999,0.00006127151,0.00006608318,0.000004047391,0.001051569,0.00003338003,0.0009317241,0.00004158191,0.00005269655],"category_scores_gemma":[0.00007077821,0.00001400464,0.00005154414,0.0004622768,0.001402771,0.00006715306,0.0001778556,0.0001034735,0.00001776188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001510157,"about_ca_system_score_gemma":0.0000263333,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000243786,"about_ca_topic_score_gemma":0.002649789,"domain_scores_codex":[0.9991172,0.00006308186,0.0001346327,0.0001829281,0.0001564305,0.0003457187],"domain_scores_gemma":[0.9995992,0.0001506822,0.00008457727,0.00009070318,0.00004447424,0.00003034088],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000007710692,0.00002927165,0.3170015,7.474888e-7,0.000001603301,4.195888e-7,0.00001497435,0.00002830157,0.673968,0.004592887,0.0003410762,0.004013515],"study_design_scores_gemma":[0.00003170799,0.00003984469,0.9597125,0.000001222313,0.000001979088,0.000006113597,0.00003889978,0.0000488247,0.0178419,0.003913786,0.0183156,0.00004762557],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920148,0.0002807403,0.000001176139,0.003799512,0.0002698554,0.0001105638,0.0000120824,0.00001351188,0.003497712],"genre_scores_gemma":[0.9991526,0.00001196858,0.000013015,0.00018505,0.00009587331,0.000004586562,0.000002180076,2.028752e-7,0.0005345176],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6561261,"threshold_uncertainty_score":0.8087927,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003465482487492792,"score_gpt":0.1635954751246506,"score_spread":0.1601299926371578,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}