{"id":"W2154453217","doi":"10.1128/aem.70.1.174-181.2004","title":"Metabolism of 2,2′- and 3,3′-Dihydroxybiphenyl by the Biphenyl Catabolic Pathway of <i>Comamonas testosteroni</i> B-356","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Comamonas testosteroni; Metabolite; Hydroxylation; Chemistry; Biphenyl; Catabolism; Metabolism; Enzyme; Substrate (aquarium); Stereochemistry; Biochemistry; Dioxygenase; Cometabolism; Biotransformation; Organic chemistry; Biology; Bacteria; Bioremediation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001401491,0.0005332451,0.0002859623,0.000202802,0.0001346427,0.0003692621,0.0001400915,0.0002391725,0.0004352023],"category_scores_gemma":[0.0001538357,0.0001200057,0.0002889927,0.0002769679,0.0001333684,0.0002160289,0.0001930704,0.0002472374,0.000382305],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003028651,"about_ca_system_score_gemma":0.0002884733,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003615596,"about_ca_topic_score_gemma":0.002744581,"domain_scores_codex":[0.9998048,0.0000420729,0.00001615732,0.0000335053,0.00005936722,0.00004407268],"domain_scores_gemma":[0.9998796,0.00001635446,0.00002821866,0.00001311041,0.00003281279,0.00002993177],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005554385,0.00001597155,0.0004421558,0.00002177013,0.000003443083,0.00002903053,0.00001076112,0.00004729724,0.9988223,0.00001781156,0.000007612981,0.0005263164],"study_design_scores_gemma":[0.000004742716,0.0002644055,0.009187645,0.000003977875,0.00001257207,0.0001578724,0.00007193463,0.0005611709,0.9888684,0.00002907364,0.0008316934,0.000006447117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964615,0.0008407494,0.001499342,0.00006209916,0.00001358646,0.0000165838,0.0005010085,0.00004096924,0.0005642043],"genre_scores_gemma":[0.9946307,0.0005274693,0.002014846,0.00005386532,0.000003991775,0.00001530112,0.001331881,0.0000175552,0.001404305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003615596,"threshold_uncertainty_score":0.007189095,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003041876093908897,"score_gpt":0.1555109484553039,"score_spread":0.152469072361395,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}