{"id":"W2154998018","doi":"10.1128/jb.185.20.6042-6050.2003","title":"Regulation of Expression of the 2-Deoxy- <scp>d</scp> -Ribose Utilization Regulon, <i>deoQKPX</i> , from <i>Salmonella enterica</i> Serovar Typhimurium","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Operon; Promoter; Repressor; Regulon; Salmonella enterica; Gene; Genetics; Transcription (linguistics); lac operon; Molecular biology; Escherichia coli; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001158231,0.0004349897,0.0002380378,0.0001668595,0.00009335001,0.0003680424,0.0001200454,0.0001721981,0.0004455982],"category_scores_gemma":[0.0001850508,0.000178851,0.0002685041,0.0001430734,0.0002676698,0.0001010149,0.0002819607,0.0003655085,0.0002886854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004013414,"about_ca_system_score_gemma":0.0002030739,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001720733,"about_ca_topic_score_gemma":0.001500548,"domain_scores_codex":[0.9998145,0.00002797692,0.00001606146,0.00005039147,0.0000335605,0.00005753278],"domain_scores_gemma":[0.9998204,0.00005253429,0.0000414029,0.00001716057,0.00003206207,0.00003644613],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000698286,0.0000138536,0.0003266787,0.00001810933,0.000002130857,0.00002548502,0.00002269486,0.00006081411,0.9989493,0.00004636233,0.00002868267,0.0004360377],"study_design_scores_gemma":[0.00001563778,0.0002329075,0.02888691,0.00001283735,0.00001524338,0.0001503706,0.0001207396,0.00282877,0.965751,0.00006281989,0.001910192,0.0000126335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970027,0.0004271885,0.001057266,0.00006893354,0.00002066961,0.00001234824,0.0004459034,0.00004653676,0.000918437],"genre_scores_gemma":[0.9959555,0.0002595246,0.001346317,0.00005141712,0.000005176405,0.00001928868,0.0007928148,0.00002135474,0.001548724],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001720733,"threshold_uncertainty_score":0.003421426,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01516655865727424,"score_gpt":0.2262947043409465,"score_spread":0.2111281456836722,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}