{"id":"W2155011096","doi":"10.1128/aem.71.8.4469-4477.2005","title":"Identification and Characterization of Putative Virulence Genes and Gene Clusters in <i>Aeromonas hydrophila</i> PPD134/91","year":2005,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Biomedical Research Council; Ministerio de Ciencia y Tecnología; Canadian Institutes of Health Research; Generalitat de Catalunya","keywords":"Virulence; Biology; Aeromonas hydrophila; Microbiology; Genetics; Gene; Pathogen; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009073868,0.0001741501,0.000227421,0.00007959593,0.00007885146,0.000008158955,0.0000686723,0.0001606233,0.00002976745],"category_scores_gemma":[0.000001222,0.0001640985,0.0000191503,0.00004175564,0.000534473,0.00007976181,0.0001516916,0.00009047038,0.0000293227],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000226036,"about_ca_system_score_gemma":0.000003336245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008536695,"about_ca_topic_score_gemma":0.000005569553,"domain_scores_codex":[0.9990965,0.00005167874,0.0002740869,0.0003756465,0.00001024909,0.0001918298],"domain_scores_gemma":[0.9997237,0.00002026899,0.0001330207,0.0001005417,0.000002650389,0.00001983575],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000700888,0.00008190287,0.002077633,0.00001985197,0.00004566578,7.913731e-7,0.000633417,0.000002163244,0.9871364,0.000151454,0.00001725149,0.009763401],"study_design_scores_gemma":[0.001554403,0.00006343109,0.04258432,0.00001057505,0.00006310436,0.00006172893,0.000460678,0.00001126485,0.9493785,0.00005272236,0.005505925,0.000253368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967211,0.002368407,0.00009160826,0.0001777814,0.00004542135,0.0003198633,0.0002169472,0.00001145727,0.00004745515],"genre_scores_gemma":[0.9955539,0.002268732,0.00006866136,0.0002454053,0.00001302988,0.00002063049,0.00159481,0.00001087731,0.0002239587],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04050669,"threshold_uncertainty_score":0.6691744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003195580375824898,"score_gpt":0.1714314061478166,"score_spread":0.1682358257719917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}