{"id":"W2155097679","doi":"10.1186/1471-2180-13-175","title":"Spatial distributions of Pseudomonas fluorescens colony variants in mixed-culture biofilms","year":2013,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Biofilm; Biology; Pseudomonas fluorescens; Wild type; Phenotype; Colonization; Microbiology; Colony morphology; Mutant; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001834364,0.0001956585,0.0002146991,0.0007725647,0.0001872674,0.0004938758,0.0002459952,0.000251974,0.0005816987],"category_scores_gemma":[0.0003944212,0.0001803599,0.0001494233,0.0004131845,0.0001885709,0.000218963,0.0004207663,0.0003430878,0.0001815288],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002261942,"about_ca_system_score_gemma":0.0001824986,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002191622,"about_ca_topic_score_gemma":0.002149402,"domain_scores_codex":[0.9996972,0.0000217588,0.00002187819,0.00008318067,0.0001231883,0.0000526857],"domain_scores_gemma":[0.9995245,0.00009708624,0.0001172113,0.00002523013,0.0001628795,0.00007312843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002040319,0.00004667399,0.01709186,0.00004945753,0.00001944886,0.00009708011,0.0001793117,0.0001990118,0.9782437,0.00007536067,0.00005993528,0.003734071],"study_design_scores_gemma":[0.0000236105,0.0007327506,0.4582528,0.00002444399,0.00008957762,0.001645387,0.0009129615,0.005011873,0.5318782,0.000191,0.001187215,0.00005030747],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966463,0.0004210387,0.002114325,0.00002179774,0.000004517495,0.0000158427,0.0002393271,0.00002944777,0.0005074255],"genre_scores_gemma":[0.9962695,0.0001988341,0.002886272,0.00001207044,0.000004009406,0.00003248955,0.0002610991,0.000008359778,0.0003273611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002191622,"threshold_uncertainty_score":0.004357696,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007393092453416649,"score_gpt":0.2155339113873325,"score_spread":0.2081408189339159,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}