{"id":"W2155129790","doi":"10.1128/mbio.00180-13","title":"Divergent Protein Motifs Direct Elongation Factor P-Mediated Translational Regulation in Salmonella enterica and Escherichia coli","year":2013,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Toronto","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; British Columbia Knowledge Development Fund; National Institutes of Health","keywords":"Salmonella enterica; Salmonella; Escherichia coli; Elongation factor; Microbiology; Bacterial protein; Enterobacteriaceae; Biology; Bacteria; Chemistry; Computational biology; Genetics; Gene; Ribosome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004700547,0.0001073534,0.00009867214,0.00004213566,0.00003507605,0.00002396224,0.00006356576,0.0002127609,0.0001010361],"category_scores_gemma":[0.00002372603,0.0001018811,0.000024822,0.00008536581,0.00005318897,0.000004650658,0.0000412632,0.0000565668,0.00001418784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000965565,"about_ca_system_score_gemma":0.00001943471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009608365,"about_ca_topic_score_gemma":0.0000593356,"domain_scores_codex":[0.9993278,0.00004171343,0.0001694518,0.0002460626,0.00006854008,0.0001463725],"domain_scores_gemma":[0.9997378,0.000004182079,0.00005558296,0.0001201911,0.00004020964,0.00004205222],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000272473,0.00003892419,0.006969551,0.000006548555,0.00001087512,2.795143e-7,0.00003305016,0.000006493331,0.9897483,0.00001375205,0.00007313272,0.003071852],"study_design_scores_gemma":[0.0004317092,0.0001497383,0.4666289,0.000008409029,0.000003251201,8.702357e-7,0.000008997719,0.0005326858,0.5277429,0.0001098603,0.004242728,0.0001399867],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984525,0.0001543094,0.0002281022,0.0004805339,0.00007256833,0.0004237736,0.00002640437,0.00001371981,0.0001480211],"genre_scores_gemma":[0.9986451,0.00007145915,0.0006735896,0.00004577259,0.00005813282,0.00004909437,0.0002363585,0.00001096607,0.0002094741],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4620054,"threshold_uncertainty_score":0.4154592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006397833388453998,"score_gpt":0.194334191373484,"score_spread":0.18793635798503,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}