{"id":"W2155220273","doi":"10.1093/molbev/msn235","title":"Candidate Genes and Adaptive Radiation: Insights from Transcriptional Adaptation to the Limnetic Niche among Coregonine Fishes (Coregonus spp., Salmonidae)","year":2008,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Coregonus clupeaformis; Limnetic zone; Coregonus; Adaptive radiation; Salvelinus; Evolutionary biology; Parallel evolution; Candidate gene; Genetics; Gene; Ecology; Phylogenetic tree; Trout; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002176262,0.0001630388,0.0001988679,0.000510728,0.0001473171,0.0002512474,0.0001579064,0.0002146518,0.0005309135],"category_scores_gemma":[0.0002568786,0.00009384178,0.0002018196,0.0003815758,0.000316407,0.00019699,0.0002854023,0.0001988639,0.00007925004],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001644532,"about_ca_system_score_gemma":0.0001855043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007323801,"about_ca_topic_score_gemma":0.001944559,"domain_scores_codex":[0.9998826,0.00001255483,0.000007879992,0.00006288822,0.00001950285,0.00001453501],"domain_scores_gemma":[0.9998161,0.00005599181,0.00006941702,0.000007739412,0.00002323342,0.00002761911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004410382,0.0000436653,0.1460683,0.000238069,0.00003809434,0.0001672786,0.0004964375,0.000216885,0.8389286,0.000194883,0.00003599745,0.01313074],"study_design_scores_gemma":[0.00001289439,0.000230744,0.9817963,0.00001455865,0.00003167812,0.0002459522,0.0005261693,0.0007662781,0.01543,0.000176309,0.0007597901,0.000009252868],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987311,0.000417866,0.0005085371,0.00002600314,0.000001953092,0.000004608427,0.0001203218,0.000003976469,0.0001857376],"genre_scores_gemma":[0.9969603,0.0002960277,0.001741981,0.00006209612,0.000006651946,0.00002411314,0.0004409015,0.000004059968,0.0004638914],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007323801,"threshold_uncertainty_score":0.001776159,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01147519984563821,"score_gpt":0.2106329239891884,"score_spread":0.1991577241435502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}