{"id":"W2155395980","doi":"10.1128/aac.50.2.694-701.2006","title":"Discordances between Interpretation Algorithms for Genotypic Resistance to Protease and Reverse Transcriptase Inhibitors of Human Immunodeficiency Virus Are Subtype Dependent","year":2006,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"ca_institutions":"Bayer (Canada); AIDS Vancouver","funders":"","keywords":"Nelfinavir; Saquinavir; Indinavir; Virology; Stavudine; Reverse transcriptase; Biology; Amprenavir; Ritonavir; Lamivudine; Genotyping; Concordance; Protease; Drug resistance; Genotype; Virus; Sida; Viral load; Genetics; Viral disease; Polymerase chain reaction; Antiretroviral therapy; HIV-1 protease; Enzyme; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.04269303,0.0006664473,0.0006575189,0.003102182,0.0005608422,0.002463721,0.001116712,0.0009083343,0.0004566323],"category_scores_gemma":[0.1125531,0.0005887269,0.0008819515,0.001596101,0.001044182,0.0007765282,0.001199776,0.0006438259,0.0003623128],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008869848,"about_ca_system_score_gemma":0.0005643163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002321264,"about_ca_topic_score_gemma":0.00275364,"domain_scores_codex":[0.9398746,0.03677714,0.00712147,0.004900544,0.00985886,0.001467363],"domain_scores_gemma":[0.8474278,0.1046376,0.01722219,0.0112998,0.01813812,0.001274483],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003061759,0.0001102781,0.931562,0.0002477327,0.0009719955,0.0002421242,0.001950839,0.003585827,0.01005211,0.0003347483,0.0007321427,0.04714837],"study_design_scores_gemma":[0.000109191,0.001023402,0.9398057,0.0001594816,0.0004656762,0.001646743,0.0009593808,0.02941823,0.0224127,0.001339944,0.00255779,0.0001017147],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.987148,0.001304078,0.008158192,0.00009402073,0.00007346984,0.0001619605,0.0004192412,0.0002335969,0.002407486],"genre_scores_gemma":[0.9909092,0.0001464417,0.007873656,0.00007426054,0.00001880529,0.00002478246,0.0006852756,0.0000598862,0.0002078143],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04269303,"threshold_uncertainty_score":0.225785,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01488638392648385,"score_gpt":0.2718370485688829,"score_spread":0.2569506646423991,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}