{"id":"W2155496026","doi":"10.1146/annurev-genet-110711-155621","title":"Transposable Elements: An Abundant and Natural Source of Regulatory Sequences for Host Genes","year":2012,"lang":"en","type":"review","venue":"Annual Review of Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":611,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transposable element; Exaptation; Genome; Gene; Genetics; Population; Host (biology); Evolutionary biology; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004290511,0.0002845909,0.001167056,0.00001545203,0.00009015328,0.00001087135,0.0003510757,0.0001469494,0.00008360485],"category_scores_gemma":[0.0000288195,0.0001115978,0.0003607047,0.0002193963,0.0001295743,0.00006740327,0.00005560856,0.00008406205,0.000002042301],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001177613,"about_ca_system_score_gemma":0.00005120698,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001807348,"about_ca_topic_score_gemma":0.00006754896,"domain_scores_codex":[0.9981773,0.0001407728,0.0008908967,0.0003008643,0.0002306286,0.0002594592],"domain_scores_gemma":[0.9987493,0.0001775403,0.0006052666,0.0001322236,0.0002224221,0.0001133032],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000001683753,0.00005698748,0.00005536668,0.03087246,0.00005705914,1.037807e-7,0.00004334037,8.085691e-8,0.0001988245,0.00007137344,0.00003073363,0.968612],"study_design_scores_gemma":[0.00004674277,0.0003505719,0.0002211679,0.01320696,0.0009214901,0.0000112234,0.00005489477,0.000003215295,0.00007830656,0.00003315178,0.9848341,0.0002381638],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001830111,0.9958752,0.000001739963,0.00005243165,0.0001200082,0.001007926,0.001083153,0.000009298325,0.00002006273],"genre_scores_gemma":[0.0004054619,0.9977241,0.0009513859,0.0000703474,0.0002540941,0.00005916688,0.0004139922,0.000003751026,0.0001177007],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9848034,"threshold_uncertainty_score":0.4550826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03692502025671533,"score_gpt":0.3041966021585816,"score_spread":0.2672715819018662,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}