{"id":"W2155634401","doi":"10.1094/phyto-12-10-0334","title":"Sequence Variability, Recombination Analysis, and Specific Detection of the W Strain of <i>Plum pox virus</i>","year":2011,"lang":"en","type":"article","venue":"Phytopathology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"European Social Fund; Mustafa Kemal Üniversitesi; FP7 Food, Agriculture and Fisheries, Biotechnology; Institut National de la Recherche Agronomique; European Commission; Vedecká Grantová Agentúra MŠVVaŠ SR a SAV; Agentúra na Podporu Výskumu a Vývoja; Slovenská Akadémia Vied; State Education Development Agency Republic of Latvia; Canadian Food Inspection Agency","keywords":"Biology; Potyviridae; Potyvirus; Recombination; Genome; Strain (injury); Virology; Pox virus; Genetics; Polymerase chain reaction; Serology; Primer (cosmetics); Nucleic acid sequence; Virus; Gene; Plant virus; Antibody","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001260557,0.0002621721,0.000152148,0.0003381631,0.0002076084,0.0002579159,0.0001489406,0.000272536,0.0003348671],"category_scores_gemma":[0.0004023454,0.0001428779,0.0002290262,0.0003028694,0.0002163012,0.0001139764,0.000147776,0.0003329964,0.0002553137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001679443,"about_ca_system_score_gemma":0.000149967,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001421826,"about_ca_topic_score_gemma":0.001892623,"domain_scores_codex":[0.9997972,0.00003497248,0.00001644122,0.00006647493,0.00004475169,0.00004030145],"domain_scores_gemma":[0.9997932,0.00005637072,0.00006880198,0.00002569535,0.00002917978,0.00002677886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007482423,0.00001832666,0.005287693,0.00002257909,0.000008701621,0.00008543069,0.0001064799,0.0000689313,0.9923498,0.00004003318,0.00001335014,0.001923716],"study_design_scores_gemma":[0.00003624402,0.001169134,0.5299913,0.00002960674,0.0001266074,0.003055403,0.0004483795,0.003179896,0.4565307,0.0001867418,0.005216302,0.00002966122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974753,0.0001348847,0.001579879,0.000007028264,0.000002106154,0.00001916736,0.0002036056,0.00001082606,0.0005670565],"genre_scores_gemma":[0.9944793,0.000139548,0.002307488,0.00002280382,0.000004269851,0.00003061008,0.002599318,0.00001122015,0.0004053947],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001421826,"threshold_uncertainty_score":0.002827048,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05873384178602663,"score_gpt":0.2526139249565258,"score_spread":0.1938800831704992,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}