{"id":"W2155819576","doi":"10.1128/aem.00019-08","title":"Phylogenetic Diversity and Molecular Detection of Bacteria in Gull Feces","year":2008,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Fecal contamination and water quality","field":"Environmental Science","cited_by":200,"is_retracted":false,"has_abstract":true,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Phylogenetic tree; Biology; Feces; Phylogenetic diversity; Bacteria; Phylogenetics; Gut bacteria; Evolutionary biology; Zoology; Microbiology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001346282,0.0002972656,0.0002647096,0.00099123,0.0003019241,0.0003911615,0.0001143402,0.0002936208,0.0003637069],"category_scores_gemma":[0.0004140257,0.0001395981,0.0001955156,0.0006958181,0.0002502951,0.0001502497,0.0002822334,0.0001752419,0.0002350504],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00025345,"about_ca_system_score_gemma":0.0001895008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005179236,"about_ca_topic_score_gemma":0.007443503,"domain_scores_codex":[0.9996512,0.00004455385,0.00002864204,0.000133934,0.00006514674,0.00007650962],"domain_scores_gemma":[0.9996822,0.00004325547,0.0001389072,0.00001479704,0.00006371672,0.0000570169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002427588,0.00003352311,0.2013018,0.00007814764,0.00002349017,0.0001425896,0.0004663313,0.00008093986,0.7897087,0.00003923447,0.00006666388,0.007815752],"study_design_scores_gemma":[0.000003388904,0.0003446695,0.9804388,0.00001359925,0.00002088123,0.0004375476,0.0003276164,0.0002405148,0.01718353,0.00001516048,0.0009672804,0.000007025483],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984089,0.0003258649,0.0003573564,0.00002214525,0.000002984483,0.000009791149,0.000442709,0.00001177833,0.0004186171],"genre_scores_gemma":[0.9954366,0.0003311533,0.002084996,0.00007517503,0.000007998758,0.00003696857,0.001506962,0.000005745065,0.0005144665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005179236,"threshold_uncertainty_score":0.01029813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006701884170469841,"score_gpt":0.1616061257814162,"score_spread":0.1549042416109463,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}