{"id":"W2155823893","doi":"10.1128/jb.01144-10","title":"Genome Sequence of the Obligate Methanotroph <i>Methylosinus trichosporium</i> Strain OB3b","year":2010,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Office of Science; Joint Genome Institute; Infrastructures en Biologie Santé et Agronomie; University of Louisville; U.S. Department of Energy; National Science Foundation","keywords":"Methane monooxygenase; Methanotroph; Biology; Context (archaeology); Obligate; Strain (injury); Obligate anaerobe; Microbiology; Biochemistry; Anaerobic oxidation of methane; Genetics; Enzyme; Bacteria; Botany; Catalysis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005087944,0.0001202691,0.0002748106,0.0000573154,0.00003979633,0.000006814845,0.0003689427,0.0002163619,0.00006332187],"category_scores_gemma":[0.0001908344,0.00007914447,0.0002021567,0.0001197383,0.0001747885,0.000007938621,0.0000780269,0.0003298933,0.000002835842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006884248,"about_ca_system_score_gemma":0.0001515425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000124615,"about_ca_topic_score_gemma":0.00001216438,"domain_scores_codex":[0.9989958,0.0001512735,0.00045439,0.0001373872,0.00008734766,0.0001737662],"domain_scores_gemma":[0.9988306,0.00001834079,0.000579559,0.000283044,0.0002231153,0.00006539391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001413789,0.00002882795,0.0005315219,0.000008322012,0.00004845768,0.000003211407,0.00003099069,0.00001712102,0.9975832,0.00004900669,0.0002726366,0.001285337],"study_design_scores_gemma":[0.0006226351,0.0004254832,0.04985311,0.000008056037,0.00006399129,0.000531134,0.00001821732,0.000001090087,0.740918,0.0001880654,0.2072495,0.0001206747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960957,0.0003788624,0.0002875449,0.0002620093,0.00270108,0.00007064848,0.0001173127,0.000001802588,0.00008502209],"genre_scores_gemma":[0.9968629,0.0002356567,0.001445341,0.0002947383,0.0008684415,0.00000122361,0.00001785728,0.00001308747,0.0002607347],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2566652,"threshold_uncertainty_score":0.3227418,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01015362940633997,"score_gpt":0.2317344580697829,"score_spread":0.221580828663443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}